SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|571027813|ref|YP_008899931.1| from Thermosynechococcus sp. NK55

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|571027813|ref|YP_008899931.1|
Domain Number 1 Region: 395-574
Classification Level Classification E-value
Superfamily Zn-dependent exopeptidases 1.6e-42
Family N-acetylmuramoyl-L-alanine amidase-like 0.00036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|571027813|ref|YP_008899931.1|
Sequence length 579
Comment N-acetylmuramoyl-L-alanine amidase [Thermosynechococcus sp. NK55]
Sequence
MGVNRLSLSFLSALMVGSLQPARAQGSLQVVYPPREHTTSAPQIFFIGTAPPQVAVTLNG
QVIGDRSPAGHFAPSLPLQPGLNRIILQGGNQRLEFAITRAVPEIPTSPQPLEPTADLVR
LANDIVCFTAAAPGDRAVEVQVGQRILPLEPLPPQVQLPSNLAALIHQADVVTTRPSLYR
NCLQLTQVGDYGPIQWRFASQRQLGARIRVAEPTHLPVVEVNRSLGGVARTGPSTDYSRL
TPLPVGTRARVRGQTGDWLHLDYGGWIRAEEVRFLSSALPTTATIRSITSRQRAGWTEIS
FPLDVPVPIAIQQGDRQFTLTLYNTIPQTDIIRLDADPVIQRLDWSPLDQQRVAYRFTLH
HRQQWGYRVAYEGNRLLLQLRHPPQLQRGTQPLRGIKILIDPGHGGPEDLGARGPDGTPE
KVVTLTLAKKLAPELERLGATVILTRTEDIDLDLLDRSLAIESAQPTLALSLHYNALPDA
GDARHTQGIGAFWYHPQSHDLAVFLESYLTQRLRRQHYGVFWNNLALTRPTIAPAVLLEL
GFMIHPEEFEWIVNPQAQGELARTLAQGILEWLQQATRH
Download sequence
Identical sequences V5V4T2
gi|571027813|ref|YP_008899931.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]