SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTRUP00000036241 from Takifugu rubripes 69_4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTRUP00000036241
Domain Number 1 Region: 4-455
Classification Level Classification E-value
Superfamily Sema domain 1.96e-141
Family Sema domain 0.0000000766
Further Details:      
 
Domain Number 2 Region: 561-611
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000000144
Family TSP-1 type 1 repeat 0.00028
Further Details:      
 
Domain Number 3 Region: 616-675
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000000419
Family TSP-1 type 1 repeat 0.00042
Further Details:      
 
Domain Number 4 Region: 451-501
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000112
Family Plexin repeat 0.0045
Further Details:      
 
Domain Number 5 Region: 749-791
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000012
Family TSP-1 type 1 repeat 0.0013
Further Details:      
 
Weak hits

Sequence:  ENSTRUP00000036241
Domain Number - Region: 505-558
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000112
Family TSP-1 type 1 repeat 0.00087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTRUP00000036241   Gene: ENSTRUG00000014169   Transcript: ENSTRUT00000036372
Sequence length 802
Comment pep:novel scaffold:FUGU4:scaffold_38:942946:980770:-1 gene:ENSTRUG00000014169 transcript:ENSTRUT00000036372 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VLCLSALSPWISSFSHMGVRDFSQLTLDLTRNELIVGARNFLFRLNLSNMSLIQATEWAP
DEETRQSCQSKGKTEVECQNYIRVLLVNRTEIMTCGTNAFQPLCITREVGNMNRVLERVN
GVARCPYDPRHNSTAVVTESGELYAATVIDFSGRDPVIYRSMGGMPPLRTAQYNSKWLNE
PHFISAYDIGLFTFFFLRENAVEHDCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKARL
NCSRSGEIPFYYNELQSTFYLPEQDLIYGIFTTNVNSIAASAVCAFNLSAITRAFNGPFR
SQENPRSTWLPTANPIPNFQCGTITDEGPNEGLTERSLQDAQRLYLMNDVVQPESVDPLV
LQDDVRFSNLVVDIVQGMDTLYHVMYISTEYGSILKALATPNKNLQGCYLEEMELFPPGV
REPILSLQILHSDRSLFVGLNHRVLKIPLERCSTYRTETMCLEARDPYCGWDFRQRRCTT
LEDSSNMSQWKQNITVCPLRNQTANGGFGPWSPWQPCNNDEGADGVSSCSCRSRSCDSPA
PRCGGRNCQGPTIEVSNCSRNGGWTPWSSWGQCSTTCGTGFELRQRSCNNPSPRHGGRVC
VGPSREERFCNDGMACPQPIFWSPWASSSWSQCSVGCGGGHYQRTRSCNSPPPANGGDIC
LGLHTEEALCNTHPCDGLDECVWRCWTSVCGGERRGEERRGVCVEVKRGPGLNETARRRI
SLKEEDVSASCDYGVGMRKYRSLFSLCLGGWMAWSLWSACDESGLQMRSRVCDAQGSAPC
VGNSTQRRDCNEIPGPEEPSPT
Download sequence
Identical sequences H2UH20
ENSTRUP00000036241 31033.ENSTRUP00000036241 ENSTRUP00000036241

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]