SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for SPU_007418 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  SPU_007418
Domain Number 1 Region: 6-199
Classification Level Classification E-value
Superfamily L domain-like 4e-35
Family Ngr ectodomain-like 0.0072
Further Details:      
 
Domain Number 2 Region: 243-396
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 2.75e-33
Family Toll/Interleukin receptor TIR domain 0.00091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SPU_007418
Sequence length 404
Sequence
MTSKSLFVGLRSLVRLDLRGNRLNILAPGTFNPLKRLEILLLSQSSIKVLIPNVFDGLTS
LTRLDLRDNEISAIPGDLLQSQPRLRVLYITNNRLDSIPKTLFNRTLSLHHLCMEHNRIT
TIEPGTVFPTNRTTRIDASGNPFSCTCDLSWFVDWLRLGNVELIHPDDTLCSLSSIKDMV
QSPILSFHPDQYCGINILIITGVSFSVVMVAILCLVAYRKRWWLNYKLFLLKLAIFGYEE
INQDFDTEDYEYQLNLMYDEDDQEWVDQIMKPVLQERFPHLQKVAFGDNNLNIEMFYIPA
LHYVVENSFKTVLLISNNSVDEAWFLTKLRIALEHLNDTRLDKVILIFLEDIQDDDLPYL
VRLFMSKNKPYMLWTEDEDGQELFWAQFEKSMRANRVINSVIPV
Download sequence
Identical sequences W4XVG2
SPU_007418

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]