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Domain assignment for SPU_009312 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SPU_009312
Domain Number 1 Region: 35-239
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 1.15e-34
Family Nicotinic receptor ligand binding domain-like 0.0037
Further Details:      
 
Domain Number 2 Region: 241-438
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 8.63e-25
Family Neurotransmitter-gated ion-channel transmembrane pore 0.00048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SPU_009312
Sequence length 449
Sequence
MAVSRVHWFVVLGVVSVLVCQSTCGKAPNPSPWTKLRSDLIGQDYDVTEIPSVGGINPLP
VTVHLTLQSVKDVNEKKQGMVGTSTITVVWRDERLTWMSGHYGNITVLTLPCRLVWTPSI
RLGNSNSEDSRILKNPEDIKVFIKNDGQVTLETNLLHSTACAMNLALFPFDTQTCLLLIT
SLDLFNTSVVLVPGVLKHRAGNRPLSWDVISMIHVSLLRFDQASEYAFSDLVVAIKLERL
PHHYVFFIIVPVMLLNAVGIVSFFIPVKSGERVSTCISVVLGVTIFQIVIGDVIPQTSRS
DSNPHALKYLSTSFIALVGIMLSSVAALNISYRNGSIKRKALRILFFRILATMVFKGEEG
RRKMAVKITTSAWSGDMGQDGASVCPFPEGNHGKTPPEARSSEEPVSEETDMELVAIIFD
RIFLFLFLVVELWMLSLIGSIFSTITKHD
Download sequence
Identical sequences W4Y0T9
7668.XP_001190604 SPU_009312 XP_794253.1.5271

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