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Domain assignment for SPU_010605 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SPU_010605
Domain Number 1 Region: 40-201
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 4.45e-36
Family Nicotinic receptor ligand binding domain-like 0.001
Further Details:      
 
Domain Number 2 Region: 325-556
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 3.92e-31
Family Neurotransmitter-gated ion-channel transmembrane pore 0.00034
Further Details:      
 
Domain Number 3 Region: 271-322
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 0.0000955
Family Nicotinic receptor ligand binding domain-like 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SPU_010605
Sequence length 567
Sequence
MAPQLITCMLALLMVVGHVNFVKSAPSEHHEHNFQLKSPQKNLLKGLLDRYGEPSIRPII
NQSNPVVIELRIEFKRMVSFEQSEQQLKVIVNIEMVWRDEYLTWDPAQHSGVDILFVPAE
KIWKYDLTLYSAVGKQLVEMDHDVVIVRPDGMVTWFSSAMLYSSCLVRVRYFPFDRQYCR
LILASWTHDNTSVRTFATENAFAISFGYISDDIKRKCTRKKLEFVSLRLIGGLVISSDQS
QRTRNRKGTSPYNNFRTFTTNNKNRGVWVTLKQTNETVRKEYFINNGVWDLTNIGKEYQV
LKWECCPNPWIEAHYLLLFQRQSRYYVITVIVPSTTLSLVSLLVFFMPPDSEEKVTLASS
NLLAMLLFQELVSTSMPPIGNQFPLIGSFFVASIVINTFSIFTSILIMYLHNKDNRPVPT
WLKKLAVLKTGSQQSQPVQSSPTWVKRRLSGFICASTVSKAVQVRHAQDSGQNAIDTNQI
SSKYLTLSTVPETKIKKQEDKASGNPNADGANPSLETREEIIAQWQELSMKVNRIMAFLL
TSSVMLTALVILFLYIAQEEGDFPART
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Identical sequences W4Y4G6
SPU_010605

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