SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for SPU_016040 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  SPU_016040
Domain Number 1 Region: 361-469
Classification Level Classification E-value
Superfamily PDZ domain-like 4.21e-25
Family PDZ domain 0.0055
Further Details:      
 
Domain Number 2 Region: 262-352
Classification Level Classification E-value
Superfamily PDZ domain-like 6.7e-22
Family PDZ domain 0.0048
Further Details:      
 
Domain Number 3 Region: 142-231
Classification Level Classification E-value
Superfamily PDZ domain-like 9.86e-20
Family PDZ domain 0.01
Further Details:      
 
Domain Number 4 Region: 43-137
Classification Level Classification E-value
Superfamily PDZ domain-like 1.03e-18
Family PDZ domain 0.0085
Further Details:      
 
Weak hits

Sequence:  SPU_016040
Domain Number - Region: 7-37
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0235
Family SIAH, seven in absentia homolog 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SPU_016040
Sequence length 473
Sequence
MLDRLIVLCPNTDFCTSKLPRSELEPHLQNRCPGRIVGPGAPIRHGQLTSIEINRKPNRD
LGIYFVGGNETPLIGVVVQEVIPGEVVAEDARILPGDQIVQVNSRDLRDIPHSIAREALC
SAETPLRLTIYREKQESKAPVFTTTVLQVSLTKVTGVPLGIKIAAKQSEQGIYIMEVLES
SLARRDGRLKADDRVLQINGFNVEDEMPERVARIIRDCGDRVEMVVSRQVQVTTPEVIQV
PPAELPTEPFTLLRHALAPKVRAEKTVNIKKGNKECMGISVSGGKGQRKGDVPIFITGIQ
ADGCVARHGQLKKGDILLSVNGTSLLDLPHTEAVKVLKESANARSLTLRVIEGDTDPDNE
THGYIPSWLTWLSLPECCRQSHQITLEKVPNASLGFSIVGGNDSTHGAQPIYVKTVVSDS
IAAKSGLLKCGDIIESVNSVSLVDISHKEAVTLLKNIPQRAQFTIVSWPGTIV
Download sequence
Identical sequences W4YJS6
SPU_016040

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]