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Domain assignment for SPU_016127 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SPU_016127
Domain Number 1 Region: 39-246
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 9.81e-40
Family Nicotinic receptor ligand binding domain-like 0.005
Further Details:      
 
Domain Number 2 Region: 248-478
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 1.01e-30
Family Neurotransmitter-gated ion-channel transmembrane pore 0.00056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SPU_016127
Sequence length 487
Sequence
MALLSKVSFDLVMVTMVTVILAGQGVTKAQGTNESSLSAEGRLIRDLIDTGYDPRERPLR
NNRDIVYVDVLFVLFALFELNDRRQVVSGSAWVELMWKDPRLSWNESEYDGIQYLNLDPE
TIWMPRVIMQNSAMESVEDPFAMHRSYAIIFSDGYIRVTVPARFVTFCLTNVVNFPFDNQ
TCTVTVSSPSMPGASFTPRNLASKMGNVPSNQWEVGLGDVYETVHMDPRINMNYSKIHFE
ITLTRKSYYFVINLVLPSSLINAMSLVAFWVPLDSGEKLSTAVSLLLGVVVFQIVVTDML
PVSDGDMPLLARYIFVNFLVSCGCLLSCIINFNIYKSARKIRGRFWRAFWFGFLAKIVCV
RNDFGKKEKETVANSQPKPGEIGSGQLIWRYRHGRQTPNGSIHSNRSSPPPSRPSSIDGD
RHPSSNGISSGAGKEQEKDKVKEERTEMEVIAEIVNRLIFIMFFILYLSFLIYWFVMQNF
PSSPIWT
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Identical sequences W4YK14
SPU_016127 XP_011683249.1.5271

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