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Domain assignment for SPU_019711 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SPU_019711
Domain Number 1 Region: 219-398,483-555
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 9.94e-55
Family Neurotransmitter-gated ion-channel transmembrane pore 0.0000199
Further Details:      
 
Domain Number 2 Region: 60-219
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 3.92e-47
Family Nicotinic receptor ligand binding domain-like 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SPU_019711
Sequence length 593
Sequence
MNEMKKEATEEESREKKMEMVVVHRPPKNCSEKSSSHLITTHGLFQTKMLLMFSSFGSGL
PISQIVDVDEKNQVLTSKVWMKQMWRDYHFTWDPADFGISATSSANGTFDMKSHAWANIY
FNGTVYWFPPAVYKSSCKIDVQYFPFDEQRCVMKFGSWSYDQHKIDLIPVSDSAEKKDYW
ENGEWTIVKSPAERHAIKYPCCDDIYVDVTYTFVLRRKPLFYFAYLLLPCGIISFNTVLV
FYLPPDITGKMSLCTSVLLSMVWFLLLVTQCIPSNANNFPLIVKYLLFTMTIVASSIVLT
VFVLNIRHRSPYTHIMPQWVRTVFIDMLPRFVGLQRPNQKRKRDMHSINMSGRESIATCN
HVDAMMTETSSHSSEADNDLMQAHLSHQATHNYAVDKNSKPKENNAKMNAGNKNPAVEPL
LNCMLAQKSMKAERFYTPFNEKNNAIPHYIIPDELSGHPHAGHMENNIRSSSHTPTSKKR
PRPLLQEEPPLQYMVAQQTVEDIMYLTSRSINNEYATKAREEWKLVAMVIDRIFLIIYLC
AVFIGTLSIVLEAPLAREFFMDVLFRNGTSFNEDPTLMNEACSTYFLTDCAEL
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Identical sequences W4YV62
SPU_019711

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