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Domain assignment for SPU_021043 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SPU_021043
Domain Number 1 Region: 25-227
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 5.62e-49
Family Nicotinic receptor ligand binding domain-like 0.00022
Further Details:      
 
Domain Number 2 Region: 233-316
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 0.000000889
Family Neurotransmitter-gated ion-channel transmembrane pore 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SPU_021043
Sequence length 374
Sequence
MKICSIVIALLLVITGEAIANQDFQGNLYDFLFSNYTKSFLPHHDQPHYVNVSLDLQLLQ
KLNLFQGTMHMNVWRALVYKDERLTWDPTAFGNIRRFNVYSSVVWVPDISIWNSASNEPS
IDYSEAIIYPDGTIALVVPMFVDASCGLDLSDFPYDTHNCSLTFGSWTNDNSRIVLDTTS
NSVGLSHFSDNPMWHIVETSVQKNSVVSDCCEEVYEDVTFYITISRRESHGRIGPAVVSV
WLILAVFLMQPSKGGERIIFAGLVFVSLIVLNAALSAEVPAYSVTRLGRFLLAGMLINSI
VVVINAIIYRFYPAEQQGTTKVSNSVVPPLNETGGGGNILLYHDRNCFLKIKSRAVLKLF
SLSHIEIKFGLRNT
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Identical sequences W4YYW7
SPU_021043

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