SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for SPU_026088 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  SPU_026088
Domain Number 1 Region: 1-171
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 1.83e-23
Family Neurotransmitter-gated ion-channel transmembrane pore 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SPU_026088
Sequence length 174
Sequence
MVLVSASTVLTAIVLYIHHRGTYVGRAPSWFRRFTLDYLAKFMCMGDCHNPDVKDKIPKI
NFENASGSSGSSTGVVEAGLHSNEMPLELDVANLPTSQSSTCVQLDRRGRIRFIMSQIAS
CLQQVVEHSEDAIVDEEIKGEWMRIAFVVDRFFMWLFGLSTAVATCGVLLQVKE
Download sequence
Identical sequences W4ZD51
SPU_026088

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]