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Domain assignment for SPU_027434 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SPU_027434
Domain Number 1 Region: 93-298
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 1.18e-49
Family Nicotinic receptor ligand binding domain-like 0.00084
Further Details:      
 
Domain Number 2 Region: 300-527
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 3.53e-27
Family Neurotransmitter-gated ion-channel transmembrane pore 0.00064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SPU_027434
Sequence length 535
Sequence
MSPCVERDSERLRQEVYTITRREELSRVKFYLRELLHFALKLSLLRYWLGVIIDQSRRIR
DACLVSNCAVIHLLGSSSHLSPLADPLTNPSKLLYQKLMDDYGSPAIRPVVNLSHPTVGS
HRLLISQIIDFDEPLQTLTLSSWQRMDWRDEFLVWDPKNYSDVTKLEIPEAIIWKPDIQL
YENVNKEFLRLSETKLLVDHEGYVTWYAPMISTSSCRVNVRYFPFDTQKCNLSFSSWVYT
MDQMKLYLSNKTEATQNIFMGNGVWNLAKVLRTQKFHKYDCCPAQYMSVVYTIVLTRTYA
FYLFNMIIPSITLCLTNTLVYLIPPESGEKVQFAVSNLLASILFQQLIATTMPPLGDELP
LLGIFFLFMVMCSCFSIAFSILSLQLYNKKGEKPVPACLRKLILLSHPVAHRRLLHRVST
MRAMRLSHNGQSEHKSDNTSSASKEDADVEETQINKSDVDNENNAELESQTKTKEKRTLQ
SNGRRRQSASFKRDVVIEEWRLLARVVDKMVFTLVLILTCAVLLSLILEFLNKKE
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Identical sequences W4ZGX5
SPU_027434

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