SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for SPU_014266 from Strongylocentrotus purpuratus v3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  SPU_014266
Domain Number 1 Region: 76-182,307-425,485-663
Classification Level Classification E-value
Superfamily L domain-like 8.84e-48
Family Ngr ectodomain-like 0.014
Further Details:      
 
Domain Number 2 Region: 731-887
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 3.14e-35
Family Toll/Interleukin receptor TIR domain 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SPU_014266
Sequence length 893
Sequence
MSFKHPSSLFPSLVMAFLLPLTLQAFQGDSMEIVSSGLHTGSVRRGCYQNVEQRKAYCSS
RGLDSVPQNLAEDTKELDLSENNITVLPKFSFKRYPLITDLDLSANDIRVIEPTAFHPLK
KLVNLSIIVNRNLVLPVSGLFRWASKLTLLNLSGSNLKSLPNDTLKWNQHIDYLDLGFNH
LTFINISTCGSVRYAGFAYNHIEQLTKETFTFGCQTDHLELGNNPIKLIDPIAIAALHTH
SLILRHAGGHSWTPEMLRNLTIGISRSHIKSLKVDVNLGHFPQDVFTPLRDYSFTLLDFS
NNKVNALFPFVFSNLTLLDQLDLSNNKITTIEPNFFDSMQALKVLNINFNQVRSINTGNH
TWTINLIKLYLSMNSLTEISKFAFLGLQNLTLLDLSFNRRLASIYLTSFTGLDNIHTIDL
SGCSIRYLQLYTPVLRSLYMKRNYLFGAPINPLEPGKSFKNSMNLVYLDIQESQVFPYNL
WDPATNVSLFEGLFNLTTLDMSKNPNIGKFGLDLGIFHHLSALQELSLDACAISNLHPLV
FTGLDSLQKLNLSGNNLEQIRIGLLTGLGQIRSIKLDGNILALLDEGTFLNKSRLTSLSL
ANNKLTFLNESIFRPIYSSLSLVDFSQNPLICTCDFEWLLHWLNQNGTVRLANENQTLCA
PSSLASLREKPLLHFNPTELCRFNYAIFSLIPIVIVSLVVLLALVYHQRWRLRYKLFLLK
LAVIGYRERLDARDHNDYEFDVNIIFYHDDEEWIRDNLRPTLEVKLPQFQRNTFGDADLI
PGMYYLDAVDYVVSRSYKTIILLSRAAVRDRWFMLKFRTAMNHVSDTQTEFVVVVFLEDI
PDDEIPFLARLFLSDGRPYLHWTEDVRGQEYFWNELAKNLTINLRTNDLIPNE
Download sequence
Identical sequences W4YET5
SPU_014266

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]