SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for 92604.m00006 from Trichomonas vaginalis

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  92604.m00006
Domain Number 1 Region: 3-127
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.3e-17
Family Retroviral integrase, catalytic domain 0.021
Further Details:      
Weak hits

Sequence:  92604.m00006
Domain Number - Region: 230-259
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.0963
Family Tudor domain 0.01
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 92604.m00006
Sequence length 288
Download sequence
Identical sequences 92604.m00006

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]