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Domain assignment for gi|345008566|ref|YP_004810920.1| from Streptomyces violaceusniger Tu 4113

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|345008566|ref|YP_004810920.1|
Domain Number 1 Region: 70-142,172-304
Classification Level Classification E-value
Superfamily LmbE-like 7.19e-19
Family LmbE-like 0.012
Further Details:      
 
Domain Number 2 Region: 371-602
Classification Level Classification E-value
Superfamily Fucose-specific lectin 0.000000000000392
Family Fucose-specific lectin 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|345008566|ref|YP_004810920.1|
Sequence length 712
Comment LmbE family protein [Streptomyces violaceusniger Tu 4113]
Sequence
MRGTGTTRRQTLAALAALTAAGAAGVAGVAGCGGGGSRGTASVPAGPARADGPGAAEPFT
STVGDKQALLLQVMAHPDDDLYFMNPDAEQVLRSGVPVVCVYVTAGEARGINHQAGTPIP
PADKAAYSASRHQGLRQAYARMIGLNQFAPWQRSALRLPGGVTAETNTLANGARRVRLVF
LNIAMLSEGGVRIPALWSTPGAVMSTLRAAGSPVPHPSSYGHQTLVDVLAEIMDRYRPTL
IHTLDPDPDFQVHDVLHPKDNDQPGCSDHRDHTPVALFTWKAIAQWVAASAQRDKHAPRF
TTTAFRGYYNQRWPHNLPPAVLARKARVIKSYGGAPDWDCGNAAGCGDYGQGGVRPLRNR
KGWIRSTHYRYPTALPAPTTDAQGRLVAYGVLGAQAVRWRETAPGSGRFGAPLGLGGGPL
APALTAVRDSAGRQVLFALRFAALGGQGAAGLREIVVLEQRRPDGPFRAWTGLGTPETST
EHGRRVGCPAAVATPDGRVHLFVRTADKGLATRVRDGSGHWSPWQRLGGAEVQDGMTALL
DAEERVHVLAPGRDTVHHWAQEWAGGPVALRPPTGLPRPGGDPLGAAVAPDGSLTLVYRT
PAATVPAVHGDDTSLTVRHFEGYGAIAAHTVAEPSGRREAKTLLLVGRDLGGEVQVQYGT
GPDARPLRSPGRLIPVGAPALLADDGHQGVCVVGMAPDATPWIWRPRPTSRA
Download sequence
Identical sequences G2PBL8
gi|345008566|ref|YP_004810920.1| WP_014054159.1.85068

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