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Domain assignment for psu|NCLIV_006140 from Neospora caninum

Domain architecture


Domain assignment details

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Strong hits

Sequence:  psu|NCLIV_006140
Domain Number 1 Region: 848-900
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000000000000368
Family Ubiquitin-related 0.00099
Further Details:      
 
Weak hits

Sequence:  psu|NCLIV_006140
Domain Number - Region: 141-167
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0547
Family CHHC finger 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) psu|NCLIV_006140
Sequence length 915
Comment | organism=Neospora_caninum | product=Ubiquitin, related | location=NCLIV_chrII:1422092-1432405(-) | length=915
Sequence
MADVSGHGAEGAVAKEPAEYQGNVSNRRGESRTDWPNPLFPDARSAAGARPGALQESSCS
VATSSSSSCSIKPAEGRDCAETSLGGSASYGRTREGAGASGEDSAACAPAQLDGRKGKKA
LARGSVSGGHEAVEGGENLEDRIPCPVDPRHSIYLGRVSAHVRKCTKIRDMAFAHLLPFV
LPGCNCGETGEANGKAERAIDQASKREGSNSSVRFSGDDQPRKPGAGDGEPIETIVETVR
SEGAAADTKPDTSSPSPRITVCISPSSSACLSPSPLPPLDIEELHKRVLRAVKQCCEELG
LSLSLVLPPASDELAQDTEEVERHERYGWNPAAELLRAAAVSEQRATHERDDLTSTRAEK
TGHTEHEGSVVSDTLGRKRGTDAEEERRASILMDCITRASKAAAQHRQRQRRGSVSDPAE
PQNGEGSTEGMFPLAFSTSFLESLGLSPLAWLRKVMALMDKHDEQNAQLVAICALVGFLP
TSRDALQSLLVVELGAGKAALTRWLATWTVAAFADAAKRRASATQASGGQPEEACVPGDE
HPKKRERAAADDEISHEKVNPDVSLQTEERDRGKVVGVRFVVVEREARRNAKELKDEEMQ
SMSAKRIRSENHFKKRKHAGAMEAASSEGGERQDDQNGSREDPRFVRHVVRLRIDISDFD
LRAMLRYMNLGDSRALRHEASLDAYWELTKQLGFKGGADMKEMENCLESHFLNKPAERVL
GVAKHLCGGGTDVALRCFVRCRKAFTEIKAMCPRQSTGDSGLQREAVAEAGPRRIVDPSE
VSLCLCIAPCCHHRCDEQSFVGVEILRKLGFADEEFPRLAAATGFRGLMNLARQQIGGRC
AVLASCLGKTVVLDNVQASDSILDIKRRVEQREGIPVDQQRLVFNGKQLENGKTVQDYNL
SFNEERLNPAGDVLT
Download sequence
Identical sequences F0V8U7
XP_003880173.1.31604 psu|NCLIV_006140 psu|NCLIV_006140

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