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Domain assignment for A0A023JB17 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A023JB17
Domain Number 1 Region: 84-433
Classification Level Classification E-value
Superfamily gp120 core 3.53e-178
Family gp120 core 0.000000000137
Further Details:      
 
Domain Number 2 Region: 481-605
Classification Level Classification E-value
Superfamily Virus ectodomain 1.94e-58
Family Virus ectodomain 0.0000122
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A023JB17
Sequence length 803
Comment (tr|A0A023JB17|A0A023JB17_9HIV1) Envelope glycoprotein gp160 {ECO:0000256|SAAS:SAAS00936864} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVMGIMRNCQQWWIWVILGFWMVMICNVVGNLWVTVYYGVPVWREAKATLFCASDAKAY
DREVHNVWATHACVPTDPNPQEIVLGNVTENFNMWKNDMVDQMHEDIISLWEESLKPCVK
LTPLCVTLSCDKKKQEYALFYRVDIEPLNDYRLINCNTSAIAQACPKVSFDPIPIHYCAP
AGFAILKCNNKTFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEEGIIIRSQNLTDN
AKTIIVHLNESIEIVCTRPSNNTRRSVRIGPGQAFYTTGEIIGDIRQAHCNISEAKWNET
LQKVGEKLREHFPNKTIEFKPSSGGDLEITTHSFTCRGEFFYCDTSKLFNGTYNSTITLP
CRIKQFINMWQEVGRAMYAPPIAGNITCKSNIAGLLLTRDGGNTGPETFRPGGGNMRDNW
RSELYKYKVVEVKPLGIAPTEAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGAASITLTV
QARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCS
GKLICTTAVPWNSSWSNKSQKYIWENMTWMQWEKEISNYTGIIYELLEESQNQQEQNEKD
LLALDSWKNLWTWFDISNWLWYIKIFIMVVGGLIGLRIIFTVISIVNRARQGYSPLSFQT
LTPSQRGPDRLRGIEEEGGEQDKDRSIRLVSGFLALVWDDLRSLCLFSYHRLRDFILATA
RAAELLGRSSLKGLQRGWEILKYLGSLVQYWGLELKKSAISLLDTTAIAVAEGTDRIIEV
LQRICRAIYLIPTRIRQGFEAAL
Download sequence
Identical sequences A0A023JB17

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