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Domain assignment for A0A023JB78 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A023JB78
Domain Number 1 Region: 84-433
Classification Level Classification E-value
Superfamily gp120 core 3.73e-178
Family gp120 core 0.000000000168
Further Details:      
 
Domain Number 2 Region: 481-605
Classification Level Classification E-value
Superfamily Virus ectodomain 9.1e-58
Family Virus ectodomain 0.0000102
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A023JB78
Sequence length 803
Comment (tr|A0A023JB78|A0A023JB78_9HIV1) Envelope glycoprotein gp160 {ECO:0000256|SAAS:SAAS00936864} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVRGILRNYQQWWIWGILGFWMLMICNGVGEKWVTVYYGVPVWKDAKTTLFCASDAKSY
VKEVHNVWATHACVPTDPNPQEVVMENVTENFNMWRNDMVDQMHEDIISLWDQSLKPCVK
LTPLCVTLNCDKIKNEYALFYKVDVVPLNEYRLINCNTTTITQACPKVSFDPIPIHYCAP
AGYAILKCNNKTFNGTGPCQNVSSVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNN
AKTIIIHLNESVEIVCIRPGNNTRKSMRIGPGQTFYATGDIIGDIRKAHCNINGSIWNNT
LLKVKEKLSKHFPNKTIKFEGSSGGDLEITTHSFNCGGEFFYCNTSGLFNNTYNTSIILQ
CRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLLRDGGSNDTEIFRPGGGDMRDNW
RSELYKYKVVEIKPLGIAPTEAKRRVVEREKRAVGIGAVLLGFLGAAGSTMGAASITLTV
QARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQTRVLAIERYLKDQQFLGLWGCS
GKLICTTTVPWNDSWSNKSLNTIWDNMTWMQWDREINNYTETIYRLLEESQNQQEENEKD
LLALDSWQNLWSWFNISNWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
LIPVSREPDRLGRIEEEGGEQDRDRSVRLVSGFLTLVWDDLRSLCLFSYHRLRNFILVTA
RAVELLGHSSLRGLQRGWEALKYLGGFVQYWGLELKKSAISLYDTIAIAVAEGTDRIIEV
LQGIGRAILNIPTRIRQGFEAAL
Download sequence
Identical sequences A0A023JB78

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