SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A023NEE6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A023NEE6
Domain Number 1 Region: 1-147
Classification Level Classification E-value
Superfamily gp120 core 2.22e-81
Family gp120 core 0.000000569
Further Details:      
 
Domain Number 2 Region: 195-319
Classification Level Classification E-value
Superfamily Virus ectodomain 3.44e-59
Family Virus ectodomain 0.00000923
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A023NEE6
Sequence length 518
Comment (tr|A0A023NEE6|A0A023NEE6_9HIV1) Envelope glycoprotein gp160 {ECO:0000256|SAAS:SAAS00936864} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
FYATGAIIGDIRQAHCNISESTWNKTLQRVSKKLKEHFHNKTIQFEPSSGGDLEITTHSF
NCRGEFFYCNTSGLITLQCKIKQIINMWQGVGRAMYAPPIEGNITCTSNITGLLLTRDGG
ETFRPGGGDMRDNWRSELYKYKVVEIKPVGIAPTKAKRRVVEREKRAVGIGAVFLGFLGA
AGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQTRVLAIER
YLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKTQDDIWNNMTWMQWDREINNYTNTIYRL
LEDSQNQQEKNEKDLLALDSWNNLWNWFGITKWLWYIKIFIMIVGGLIGLRIIFAVLSIA
NRVRQGYSPLSFQTLTPNPRGPDRLGGIEEEGGEQDRDRSIRLVSGFLALVWDDLRSLCL
FSCHRLRDFILVATRAVELLGRSSLRGLQRGWEALKYLGSLVQYWGRELRKSAVSLLDTI
AIQVAEGTDRIIELIQRIGRAIYNVPRRIRQGFEAALQ
Download sequence
Identical sequences A0A023NEE6

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]