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Domain assignment for A0A059XHL8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A059XHL8
Domain Number 1 Region: 131-289
Classification Level Classification E-value
Superfamily Retrovirus capsid protein, N-terminal core domain 2.2e-79
Family Retrovirus capsid protein, N-terminal core domain 0.0000000666
Further Details:      
 
Domain Number 2 Region: 2-136
Classification Level Classification E-value
Superfamily Retroviral matrix proteins 2e-63
Family Immunodeficiency virus matrix proteins 0.000000992
Further Details:      
 
Domain Number 3 Region: 280-362
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.4e-33
Family Retrovirus capsid protein C-terminal domain 0.0000134
Further Details:      
 
Domain Number 4 Region: 380-431
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 3.14e-17
Family Retrovirus zinc finger-like domains 0.0000387
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A059XHL8
Sequence length 503
Comment (tr|A0A059XHL8|A0A059XHL8_9HIV1) Gag polyprotein {ECO:0000256|RuleBase:RU004487, ECO:0000256|SAAS:SAAS00998370} KW=Complete proteome OX=11676 OS=Human immunodeficiency virus 1. GN=gag OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MGARASVLSGGKLDAWEKIRLRPGGKKKYKLKHIVWASRELERFALNPGLLETSEGCKQI
IGQLQPAIQTGSEELKSLYNTVAVLYCVHAKIDIKDTKEALEKLEEEQSKSNKKAQQTAA
ATGNNSQVSQNYPIVQNLQGQMVHQSISPRTLNAWVKVIEEKAFSPEVIPMFSALSEGAT
PQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPAQAGPNPPGQIREPRGSDIAGTT
STLQEQITWMTSNPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRF
YKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPQATLEEMMTACQGVGGPSHKA
RVLAEAMSQATNSATAILMQRGNYKGQRKIIKCFNCGKEGHIAKNCRAPRKKGCWKCGRE
GHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPAESFRFGEETTPSQNSQKQD
QKDKDLYPLTSLRSLFGSDPSSQ
Download sequence
Identical sequences A0A059XHL8

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