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Domain assignment for A0A060AFP1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A060AFP1
Domain Number 1 Region: 151-502
Classification Level Classification E-value
Superfamily gp120 core 7.95e-164
Family gp120 core 0.00000000131
Further Details:      
 
Domain Number 2 Region: 550-674
Classification Level Classification E-value
Superfamily Virus ectodomain 1.19e-55
Family Virus ectodomain 0.000016
Further Details:      
 
Domain Number 3 Region: 85-136
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000981
Family gp120 core 0.00018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A060AFP1
Sequence length 873
Comment (tr|A0A060AFP1|A0A060AFP1_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVRGILRNYQHWGIWGILGFWMFMICNGVGNLWVTVYYGVPVWREAKTTLFCASEAKSY
EKEVHNVWATHACVPTDPNPQENVMGNVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVK
MTPLCVTLNCTDVSNKTADTYNKTVDNSIKEISNCSFYGTTELNDKQQKMHALFYRLDIV
PLDNENKINENKSNSNDINYRLINCNTSTITQACPKVNFDPIPIHYCAPAGYAILRCNNE
TFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKDIIIRFENLANNVKTIIVHLNQS
VEIVCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAYCNINEDKWNKTLQMVGKKLKEH
FPNKTIPFKPPSGGDLEITMHSFNCRGEFFYCNTSKLFNSTYMPKHAKCHTITKAHAIIT
IPCRIKQIINMWQEVGRAMYAPPIKGKITCNSSITGLLLTRDGRENKKNSKGGDTETFRP
EGGNMKDNWRSELYKYKVVEIKPLGIAPTGAKRRVVEREKRAVGLGALFLGFLGAAGSTM
GAASMTLTVQARQLLSGIVQQQNNLLRAIEAQHQLLQLTVWGIKQLQARVLALERYLQDQ
QLLGLWGCSGKLICTTNVPWNSSWSNRNQTEIWEKLTWMQWDKEVSNYTDTIYRLLEDSQ
NQQEKNEKDLLALDSWKNLWNWFDITNWLRYIQLFIMIVGGLIGLRIFFAVISIVNRVRQ
GYSPLSLQTLTPNAAGLDRLGGIEEEGGEQGRDRSIRLVSGFFAIAWDDLRSLCLFSYHR
LRDFILVTTRAVELLARSCLKGLQRGWEALKYLGSLVQYWGLELKKSAISLLDTIAITVA
EGTDRIIEFFLRFCRAICSIPRRIRQGFEAALQ
Download sequence
Identical sequences A0A060AFP1

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