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Domain assignment for A0A060GYB4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A060GYB4
Domain Number 1 Region: 19-381
Classification Level Classification E-value
Superfamily gp120 core 3.43e-166
Family gp120 core 0.000000000392
Further Details:      
 
Domain Number 2 Region: 429-554
Classification Level Classification E-value
Superfamily Virus ectodomain 2.22e-59
Family Virus ectodomain 0.0000071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A060GYB4
Sequence length 745
Comment (tr|A0A060GYB4|A0A060GYB4_9HIV1) Envelope glycoprotein gp160 {ECO:0000256|SAAS:SAAS00936864} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
CTDKNVTNINSGPQMEKGEIKNCSFNITTNMKDKIQKTYALFYELDVEPIENITGKNNSD
NNGTRYDSYRVISCNTSVITQACPKISFEPIPIHYCAPAGFAILKCNNKTFSGKGQCTNV
STVQCTHGIRPVVSTQLLLNGSLAEDKVVIRSDNFSDNAKTIIVQLNATVQINCTRPNNN
TRTSIHIGPGRAFYATGDIIGNIRQAHCNISMKEWGETLGKVVEKLREQYSSNKTYPNKT
IAFRPSSGGDQEITMHSFNCGGEFFYCNLSKLFNSTWNNTDTDWNKTELANIPKYNDTKH
NDTIIIPCRIKQFINMWQEVGKAMYAPPIRGVINCVSNITGLLLTRDGGTNSTNETFRPQ
GGDMRDNWRSELYKYKVVRIEPLGVAPTQAKRRVVQKEKRAVGMGALFLGFLGAAGSTMG
AASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLPARVLAVERYLKDQQ
LLGIWGCSGKLLCTTTVPWNASWSNKSLDDIWNNMTWMQWDREISNYTSLIYNLIEESQI
QQEKNEQELLALDKWASLGNWFDISNWLWYIRLFIMIVGGLVGLRIIFAVLSVVNRVRQG
YSPLSFQTHFPAPRGPDRPEGTEEEGGERDRGTSTPLVGGFLTLIWGDLRSLCLFSYHRL
RDLLLIVTRIVEILGPRGWELLKYWWNLIQYWSQELKNSAVSLLNFIAIAVAEGTDRIIE
VLQGIGRAILHIPRRIRQGLERSLL
Download sequence
Identical sequences A0A060GYB4

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