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Domain assignment for A0A060H249 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A060H249
Domain Number 1 Region: 156-496
Classification Level Classification E-value
Superfamily gp120 core 4.22e-170
Family gp120 core 0.000000000985
Further Details:      
 
Domain Number 2 Region: 544-669
Classification Level Classification E-value
Superfamily Virus ectodomain 4.04e-55
Family Virus ectodomain 0.0000111
Further Details:      
 
Domain Number 3 Region: 84-134
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000169
Family gp120 core 0.00014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A060H249
Sequence length 867
Comment (tr|A0A060H249|A0A060H249_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} KW=Complete proteome OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVKETQMNWPNLWKWGTLILGLVIICSASNNLWVTVYYGVPVWRDAETTLFCASDAKAH
DPEVHNVWATYACVPTDPNPQEIPLENVTENFNMWKNNMVEQMHEDVISLWDQSLKPCVK
LTPLCVTLKCTNITSNNSSNSSNSSSNSNGTLEDMKEMKNCSFNTTSLVTDKKEKVYALF
YRLDIVPIKDDNDSSEYRLINCNTSVIKQACPKISFDPIPIHYCTPAGYAILRCNDKNFN
GTGPCTNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIVRSENMTNNAKTIIVHLNESVEI
TCTRPGNNTRKSIRIGPGQTFFATGAIIGDIRQAHCNISFSNWNKTLHNVSKKLAEYFPN
KTIQFTSSSGGDLEITTHSFNCRGEFFYCNTSGLFNSTYMTNGIFKYNSAKDSSNIIIPC
RIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGKANGTNNTETFRPEGGDMR
DNWRSELYKYKVVEIEPLGVAPTRAKRRVVDREKRAVGIGAMIFGFLGAAGSTMGAASIT
LTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLW
GCSNKIICTTAVPWNSSWSNKSYEEIWNNMTWTEWEREISNYTGQIFAILTESQNQQDRN
EKDLLELDKWASLWNWFDITRWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLS
LQTLIPNPGGPDRPGRTEEEGGEQDRNRSVRLVSGFLALFWDDLRSLSLFSYHRLRDFIL
IAARTVELLGRSSLQGLRLGWEGLKYLGNLLLYWAQELKISAISLVDAVAIAVAGWTDRI
IEVAQRAWGALLHIPRRIRQGFERALL
Download sequence
Identical sequences A0A060H249

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