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Domain assignment for A0A060L1N8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A060L1N8
Domain Number 1 Region: 150-489
Classification Level Classification E-value
Superfamily gp120 core 4.51e-176
Family gp120 core 0.000000000159
Further Details:      
 
Domain Number 2 Region: 538-663
Classification Level Classification E-value
Superfamily Virus ectodomain 6.85e-55
Family Virus ectodomain 0.00000689
Further Details:      
 
Domain Number 3 Region: 85-131
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000306
Family gp120 core 0.00013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A060L1N8
Sequence length 854
Comment (tr|A0A060L1N8|A0A060L1N8_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVREKYQHLWRWGWKWGTMLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKA
YDTEVHNVWATHACVPTDPNPQEVLLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCV
KLTPLCVTLNCTDLRNDTSIDNSSEEMRGEIKNCSFNITTSIRDKVKKDYALFYRLDVVP
INNDNTSYRLINCNTSTITQACPKVSFEPIPIHYCTPAGFAILKCKDKKFNGTGPCKNVS
TVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSSNFTDNVKNIIVQLKESVEINCTRPNNNT
RKSIHIGPGRAFYATGDIIGDIRQAHCNISKTKWNNTLNQIATKLKEQFGNNKTIVFNQS
SGGDPEVVMHSFNCGGEFFYCKSTQLFNSTWNVNGTWNLTQSNGTEGSDTITLPCRIRQI
INMWQEVGRATYAPPIRGQIRCSSNITGLILTRDGGNNHNNTETFRPGGGDMRDNWRSEL
YKYKVVRIEPLGVAPTKAKRRVVQREKRAVGTIGAMFLGFLGAAGSTMGAASLTLTVQAR
LLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKL
ICTTAVPWNASWSNKSLEQIWNNMTCMEWDREINNYTSLIHSLIEEAQNQQQKNEQGLLE
LDKWAGLWNWFDITNWLWYIKLFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQTHLP
IPRGPDGPEGIEEEGGERDRDRSIRLVHGSLALIWEDLRSLCPFSYHRLRDLLLIITRIV
ELLGRRGWEILKYWWNLLQYWSQELKNSAVNLLNATAIAVAEGTDRVIEVLQAACRAILH
IPRRIRQGLERTLL
Download sequence
Identical sequences A0A060L1N8

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