SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A068EXA4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A068EXA4
Domain Number 1 Region: 151-487
Classification Level Classification E-value
Superfamily gp120 core 6.47e-176
Family gp120 core 0.000000000117
Further Details:      
 
Domain Number 2 Region: 535-660
Classification Level Classification E-value
Superfamily Virus ectodomain 3.71e-58
Family Virus ectodomain 0.00000881
Further Details:      
 
Domain Number 3 Region: 84-132
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000165
Family gp120 core 0.00013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A068EXA4
Sequence length 851
Comment (tr|A0A068EXA4|A0A068EXA4_9HIV1) Envelope glycoprotein gp160 {ECO:0000256|SAAS:SAAS00936864} OX=11676 OS=Human immunodeficiency virus 1. GN= OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVTEMRRNYQHLWKWGTMLLGILVICNVAGNLWVTVYYGVPVWKEATTTLFCASDAKAH
DTEVHNVWATHACVPTDPNPQEVVLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVK
LTPLCVTLNCTDLRNATNTTSSSGKKMERGEIKNCSFNITTSIRDKVQKEYALFYKLDVV
PIEDDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGKGPCTNV
STVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTNNAKIIIVQLNESVEINCTRPNNN
TRKSIHIGPGRAFYTTGEIIGDIRQAHCNISSAKWNSTLRQIAIKLREQFKNKTIVFNQS
SGGDPEIVTHSFNCGGEFFYCNSAPLFNSTWNGTERSNNTEGNGTKPITLTCRIKQIVNM
WQEVGKAMYAPPIRGQIRCLSNITGLILTRDGGNNGNGTTETFRPGGGDMRDNWRSELYK
YKVVKIEPLGVAPTEAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARLLL
SGIVQQQNNLLRAIEAQQHMLQLTVWGIKQFQARVLAVERYLKDQQLLGIWGCSGKLICT
TAVPWNTSWSNKTLEQIWQNMTWMEWEREIDNYTGLIYTLLEESQNQQEKNEQDLLALDK
WASLWNWFNISNWLWYIKIFIMIVGGLVGLRIAFTVLSIVNRVRQGYSPLSFQTRLPAPR
GPDGPEGIEEEGGERDRDGSSPLVDGFLTLIWVDLRSLCLFSYHRLRDLLLIVARIVELL
GRRGWELLKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVLEVLQRAYRGILHIPR
RIRQGLERALL
Download sequence
Identical sequences A0A068EXA4

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]