SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A068EYN2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A068EYN2
Domain Number 1 Region: 157-494
Classification Level Classification E-value
Superfamily gp120 core 3.43e-176
Family gp120 core 0.000000000182
Further Details:      
 
Domain Number 2 Region: 543-668
Classification Level Classification E-value
Superfamily Virus ectodomain 5.26e-59
Family Virus ectodomain 0.00000648
Further Details:      
 
Domain Number 3 Region: 84-137
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000173
Family gp120 core 0.00013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A068EYN2
Sequence length 859
Comment (tr|A0A068EYN2|A0A068EYN2_9HIV1) Envelope glycoprotein gp160 {ECO:0000256|SAAS:SAAS00936864} OX=11676 OS=Human immunodeficiency virus 1. GN= OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVKGIRKNCQNLWKWGTMLLGMLMICSAAEKLWVTVYYGVPVWREATTTLFCASDAKAH
DTEAHNVWATHACVPTDPNPQEVLLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVK
LTPLCVTLNCTELGNITRMNSTTGERNRTWENGTYGEIKNCSFNITTSIRNKVQKEYALM
YKSDLVPINDDNNSHSYRLINCNTSVITQACPKASFEPIPIHYCTPAGFAILKCNDKKFN
GTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSENFTDNAKTIIVQLNKTVEI
NCTRPNNNARKSIPIGPGRAWYTTGDIIGNIRQAHCNLSITQWNRTLEQIAIKLREQFKN
KTIVFNQSSGGDPEIVTHSFNCGGEFFYCNTTKLFNSTWNDTSSWKDTEGLNDTITLQCR
IKQIVNMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGNNRHNETEIFRPGGGDMRDN
WRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGTIGAMFLGFLGTAGSTMGAASVTL
TVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWG
CSGKLICTTAVPWNASWSNKSLNDIWNNMTWMEWEREIDNYTNIIYSLLEESQNQQEKNE
QELLELDKWASLWNWFNISNWLWYIKIFIMIIGGLVGLRIVFTVLSIVNRVRQGYSPLSF
QTRLPTPRGPDRPEGTEEDGGERDRDRSDRLVNGFLALIWDDLKNLCLFSCHRLRDLLLI
VTRIVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLTTTAIAVAEGTDRIIEVVQRIF
RAILHIPTRIRQGLERALL
Download sequence
Identical sequences A0A068EYN2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]