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Domain assignment for A0A068F2Z1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A068F2Z1
Domain Number 1 Region: 156-493
Classification Level Classification E-value
Superfamily gp120 core 8.73e-177
Family gp120 core 0.000000000173
Further Details:      
 
Domain Number 2 Region: 542-667
Classification Level Classification E-value
Superfamily Virus ectodomain 5.46e-58
Family Virus ectodomain 0.00000689
Further Details:      
 
Domain Number 3 Region: 84-134
Classification Level Classification E-value
Superfamily gp120 core 0.0000000000000022
Family gp120 core 0.00013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A068F2Z1
Sequence length 858
Comment (tr|A0A068F2Z1|A0A068F2Z1_9HIV1) Envelope glycoprotein gp160 {ECO:0000256|SAAS:SAAS00936864} OX=11676 OS=Human immunodeficiency virus 1. GN= OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVKGIRKNCQNLWKWGTMLLGMLMICSAAENLWVTVYYGVPVWREATTTLFCASDAKAY
DTEAHNVWATHARVPTDPNPQEVLLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVK
LTPLCVTLNCTELSNTTIDLMNSTANRTWENGTYGEIKNCSFNITTNIRNKIQKEYALMY
KVDLVPINDDNNSHSYRLINCNTSVITQACPKVSFEPIPIHYCTPAGFAILKCNDKKFNG
TGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSENFTDNAKTIIVQLNKTVEIN
CTRPNNNTRKSISIGPGRVWYTTGDIIGDIRQAHCNLSITQWNKTLEQIAVKLREQFKNK
TIVFNQSSGGDPEIVTHSFNCGGEFFYCNTTVLFNSTWNDTSSWKFTEGLNDTITLQCRI
KQIVNMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGNNMNNKTEIFRPGGGDMRDNW
RSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGTIGAMFLGFLGAAGSTMGAASVTLT
VQARLLLSGIVQQQNNLLRAIKAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGC
SGKLICTTAVPWNASWSNKSLNDIWNNMTWMDWEREIDNYTSIIYSLLEESQNQQEKNEQ
ELLELDKWASLWNWFNISNWLWYIKIFIMIIGGLVGLRIVFTVLSIVNRVRQGYSPLSFQ
TRLPTPRGPDRPEGTEEDGGERDRDRSERLVNGFLALIWDDLRNLCPFSYHRLRDLLLIV
TRLVELLGRRGWEALKYWWNLLQYWSQEIKNSAVSLLNTTAIAVAEGTDRIIEVVQRIFR
AILHIPTRIRQGLERALL
Download sequence
Identical sequences A0A068F2Z1

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