SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A069CMC5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A069CMC5
Domain Number 1 Region: 130-562
Classification Level Classification E-value
Superfamily PLP-dependent transferases 4.88e-102
Family Ornithine decarboxylase major domain 0.00000111
Further Details:      
 
Domain Number 2 Region: 567-708
Classification Level Classification E-value
Superfamily Ornithine decarboxylase C-terminal domain 1.96e-40
Family Ornithine decarboxylase C-terminal domain 0.00037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A069CMC5
Sequence length 714
Comment (tr|A0A069CMC5|A0A069CMC5_SERLI) Lysine decarboxylase {ECO:0000313|EMBL:GAK27893.1} KW=Complete proteome OX=1460083 OS=Serratia liquefaciens FK01. GN=SLIQ_14535 OC=Yersiniaceae; Serratia.
Sequence
MNIIAIMSPAGVYYKDEPIRELHTALAAMNFQLVYPKNSGDLLKLIEANARICGVIFDWD
DYSLELCSEINELNEYLPLYAFINTHSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQY
TAEYIDTITPPLTKALFNYVHEGKYTFCTPGHMAGTAFQKSPVGCLFYDFFGANTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPTGSTVLI
DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQREFTHDSIAARVADTANASWPVH
AVITNSTYDGLLYNTDYIKQTLDVPSIHFDSAWVPYTNFHPIYDGKSGMSGERIPGKVIY
ETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTSPNYGIVASMETAAAMLRGNP
GRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLNPDDNWHGFGKTD
RDHMYLDPIKVTILTPGMNELGALEESGIPAALVAKYLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMSLLRGLTDFKRAYDLNLRVKNMLPDLFAEDPDFYRNMRIQDLAAGIHSLICRH
DLPGLMQRAFDVLPEMKLTPHQMFQQQVRGNVETCELEQLVGKVAANMILPYPPGVPLVM
PGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGRYLVKVLKTPLA
Download sequence
Identical sequences A0A069CMC5
WP_044553114.1.7285

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]