SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A074ZR88 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A074ZR88
Domain Number 1 Region: 96-470
Classification Level Classification E-value
Superfamily Cullin repeat-like 2.59e-63
Family Cullin repeat 0.00056
Further Details:      
 
Domain Number 2 Region: 485-702
Classification Level Classification E-value
Superfamily Cullin homology domain 6.93e-62
Family Cullin homology domain 0.0000054
Further Details:      
 
Domain Number 3 Region: 809-894
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.23e-24
Family SCF ubiquitin ligase complex WHB domain 0.0005
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A074ZR88
Sequence length 894
Comment (tr|A0A074ZR88|A0A074ZR88_9TREM) Uncharacterized protein {ECO:0000313|EMBL:KER28332.1} KW=Complete proteome; Reference proteome OX=6198 OS=Opisthorchis viverrini. GN=T265_04792 OC=Opisthorchiida; Opisthorchiata; Opisthorchiidae; Opisthorchis.
Sequence
MGTSGRNSPIVNYTARNGSIAHSRTNRTCYHLQSLAVWLITSLPGDRNCSKWNQCAYVTR
SIAEEFIESSLHKAPLLLFLSSLLVDQVMFRASVDFAEKWAQLSQIVFRLIRCESVSRDS
WSASFSDVYTLCNSRPVSHAPTLYSATAALISARVKEIATELEQLDDSKLLPAYVHHWTT
FHKGLTYLDNLYRFVNQQYVRTLRPTEAEMCYSAVLPMADRHTMEILEVGLAHWKLYLLD
LIKDRLSACLVREVQNDRMGIDGQQDCIHASVESFRRVGELRDNERAGMDIYNKIFQAPL
LESTKTFYTSWAASRETELACSQYVNEALILREEEKNRALRYYKRSFLKVQALFQEVVVK
ARLDFINQSVRHLVAEEHKSELRNLFQLLAPDNLCSELSHWFGQHIMQLIREAIAGLPRD
LALAPAHFVENLLSIRNRFIQFIDEIFDGMSLFRNQMDKAFNQAINDRTVVNTAPGGSGS
KSPGPRPSELLSRYMDGLLRKSSKSSESELESKLTESISIFKYIDEKDVFQKYYQRMLCK
RLISNTPSSMELEESVINQLKAVCGYEFTGKFHRMFNDVQLAPELNRKFDDFLATNNVHF
RFGHHFNVLTQCSWPINLTGVVEFKLPDELQQCTSQFEAFYAASYQGRKMRWAHQSSTVE
LTLLFADKPYQIQAPTLHASILLLFDVLDSDVILVRDLSSRIQLISADTVAGGSSSENPL
TAVAATPGSSNDAMDTTPDSVSGAPYDQIHRILGPLLEINILSLESADSSFSETDKPTLS
PSTRIVLNRAFKNKRLKFRVNFGSQVKETTQTDAEQVERQVNEDRRYFIQAAIVRVMKSR
KQIDHVSLIKSVFQQASGRFQPSIPLIKRCVETLIDKGYIERSPYDPDQYNYLA
Download sequence
Identical sequences A0A074ZR88
XP_009167894.1.43250

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]