SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A075IK13 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A075IK13
Domain Number 1 Region: 151-491
Classification Level Classification E-value
Superfamily gp120 core 8.24e-172
Family gp120 core 0.000000000225
Further Details:      
 
Domain Number 2 Region: 539-664
Classification Level Classification E-value
Superfamily Virus ectodomain 1.84e-57
Family Virus ectodomain 0.00000815
Further Details:      
 
Domain Number 3 Region: 85-130
Classification Level Classification E-value
Superfamily gp120 core 0.0000000000000224
Family gp120 core 0.00017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A075IK13
Sequence length 855
Comment (tr|A0A075IK13|A0A075IK13_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVKGIRKNCQNLWRWGTLLLGILMICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAY
KTEVHNVWATHACVPTDPNPHEIELVNVTENFNMWKNHMVEQMHEDIISLWEQSLKPCVK
LTPLCVTLNCTDWGNDTSTNNSSGRLMEKGEIKDCSFNVTTNIQDKVQEERALLYRLDVV
PLDGENNPNSYRLISCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCNETKFNGTGPCK
KVTTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENITDNVKTIIVQLKEAVKINCTRPS
NNTRKSIHIGPGRAWYATGTITGDIRQAHCNISKTEWNNTLKQIVTKLREKVGNNKTIVF
NQSSGGDPEIVMHSFNCGGEFFFCNTTQLFNSSWNSSWNYNSTGNNTERSNEPIILPCRI
KQIINMWQEVGKAMYAPPIKGQIRCSSNITGLLLTRDGGNDNTNETFRPGGGDMRDNWRS
ELYKYKIVKIEPLGVAPTRAKRRVVQREKRAVGIGAVLFGFLGAAGSTMGAASMTLTVQA
RQLMSGIVQQQQNLLRAIEAQQHLLQLTVWGIKQLQARILAIERYLKDQQLLGIWGCSGK
LICTTTVPWNTSWSNRSLETIWKNMTWQQWEKEIDNYTELIYTLIEESQNQQEKNEQELL
ELDKWASLWNWFSITKWLWYIKIFIMVVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTRL
PAPRGPDRPEGIEEDGGERDKDRSGQLVDGFLALIWVDLRSLCLFIYHRLRDSLSIAARI
VELLGRRGWEILKYWWSLLQYWSKELKNSASSLFNVIAIAVAEGTDRIIEVVRRSFRAFL
HIPRRIRQGFERALL
Download sequence
Identical sequences A0A075IK13

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]