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Domain assignment for A0A075QAP5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A075QAP5
Domain Number 1 Region: 127-285
Classification Level Classification E-value
Superfamily Retrovirus capsid protein, N-terminal core domain 3.18e-80
Family Retrovirus capsid protein, N-terminal core domain 0.0000000592
Further Details:      
 
Domain Number 2 Region: 2-132
Classification Level Classification E-value
Superfamily Retroviral matrix proteins 1.92e-62
Family Immunodeficiency virus matrix proteins 0.00000188
Further Details:      
 
Domain Number 3 Region: 276-358
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.94e-33
Family Retrovirus capsid protein C-terminal domain 0.0000145
Further Details:      
 
Domain Number 4 Region: 374-425
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 1.02e-17
Family Retrovirus zinc finger-like domains 0.0000529
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A075QAP5
Sequence length 490
Comment (tr|A0A075QAP5|A0A075QAP5_9HIV1) Gag polyprotein {ECO:0000256|RuleBase:RU004487, ECO:0000256|SAAS:SAAS00998370} OX=11676 OS=Human immunodeficiency virus 1. GN=gag OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MGARASXLRGGKLDAFEKIRLRPGGKKHYMIKHLVWASRELERFALNPGLLETAEGCKQI
IKQLHPALQTGTEELRSLFNTVATLYCVHANIEVRDTKEALDKIEEEQNKCQQKAQQAKA
DTKISQNYPIVQNMQGQMVHQAISPRTLNAWVKVIEEKAFSPEVIPMFTALSEGCTPQDL
NTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVHAGPPAPGQMREPRGSDIAGTTSTLQ
EQIAWMTSNPPVPVGDIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFFKTL
RAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPGATLEEMMTACQGVGGPGHKARVLA
EAMSQTTNMNIMMQRSNFKGTKRTVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKD
CTERQANFLGKIWPSNKGRPGNFLQSRPEPTAPPAESFRFEETPAPKQEPRDREPLTSLK
SLFGSDPLSQ
Download sequence
Identical sequences A0A075QAP5

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