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Domain assignment for A0A075VQU2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A075VQU2
Domain Number 1 Region: 68-113,208-313,340-504
Classification Level Classification E-value
Superfamily gp120 core 6.93e-93
Family gp120 core 0.0000073
Further Details:      
 
Domain Number 2 Region: 555-675
Classification Level Classification E-value
Superfamily Virus ectodomain 2.04e-49
Family Virus ectodomain 0.000000633
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A075VQU2
Sequence length 881
Comment (tr|A0A075VQU2|A0A075VQU2_SIV) Transmembrane protein gp41 {ECO:0000256|RuleBase:RU363095} OX=11723 OS=Simian immunodeficiency virus (SIV). GN=env OC=Lentivirus; Primate lentivirus group. OH=9598
Sequence
MGCLGNQLLIAILLLSAYGIYCTQYVTVFYGIPAWRNATVPLFCATKNRDTWGTTQCLPD
NDDYSELALNVTESFDAWDNTVTEQAIEDVWNLFETSIKPCVKLTPLCITMRCNKTETDR
WGLTGTATPTTSAATTATPDKVVNESTLCIKNNSCAGLEQEPMVSCKFNMTGLKRDKKKE
YNETWYSRDLVCEQSTNGSESKCYMNHCNTSVIQESCDKHYWDAIRFRYCAPPGYALLRC
NDSNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGKRNSTIISLNK
YYNLTMRCRRLGNKTVLPVATMSGFFFHLQQINERPRQAWCRFGGSWRKAIQEVKETIVK
HPRYTGTNDTKKINLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNTSHPRWKK
QTPKEKHKRNYVPCHIRQIINTWHKVGINVYLPPREGDLTCNSTVTSLIATMEWIDNTET
NITMGADVAELYRLELGDYKLVEITPIGLAPTTVKRYTTTGASRNKRGVFVLGFLGFLAT
AGSAMGAASLTLSAQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEK
YLKDQAQLNSWGCAFRQVCHTTVPWPNETLLPNWNNMTWQEWEKQVNFLEANITQLLEEA
QIQQEKNMYELQKLNSWDVFGNWFDLTSWIKYIQYGVFIVLGVIGLRIVIYIVQMLARLR
QGYRPVFSSPPAYVQQIPIHKGQEQPTKEGEEGDGGDRGGSRSWPWQIEYIHFLIRQLIR
LLTWLFSNCRTYLLRIYQILQSVFQRLSSTVQRIQEVIRTEISYLQYGCRWFQEAVQAAW
RAAGETLASAWRDLWETLGRVGRGILAIPRRIRQGLELTLL
Download sequence
Identical sequences A0A075VQU2

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