SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A075VQV7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A075VQV7
Domain Number 1 Region: 68-113,212-317,344-508
Classification Level Classification E-value
Superfamily gp120 core 8.04e-95
Family gp120 core 0.00000494
Further Details:      
 
Domain Number 2 Region: 559-679
Classification Level Classification E-value
Superfamily Virus ectodomain 2.97e-49
Family Virus ectodomain 0.000000593
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A075VQV7
Sequence length 885
Comment (tr|A0A075VQV7|A0A075VQV7_SIV) Transmembrane protein gp41 {ECO:0000256|RuleBase:RU363095} OX=11723 OS=Simian immunodeficiency virus (SIV). GN=env OC=Lentivirus; Primate lentivirus group. OH=9598
Sequence
MGCLGNQLLIAILLLSAYGIYCTQYVTVFYGIPAWRNASVPLFCATKNRDTWGTTQCLPD
NDDYSELALNVTESFDAWDNTVTEQAIEDVWNLFETSIKPCVKLTPLCIAMRCNKTETDK
WGLTGNATTPTPTSSTTTTKPETAKVINESSSCIKNNNCTGLEQEPMVSCKFNMTGLKRD
KKKEYNEIWYSRDLVCEQDTEGNESKCYMNHCNTSVIQESCDKHYWDAIRFRYCAPPGYA
LLRCNDSNYSGFEPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGKRNSTII
SLNKFYNLTMRCRRPGNKTVLPVGTMSGFRFHLQQINKKPKQAWCRFEGNWKGAIKEVKE
AIVKHPRYTGTNDTKKIYLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNASHP
RWAEQTPGEKHKRNYVPCHIRQIINTWHKVGIHVYLPPREGDLTCNSTVTSLLATMDWNS
DNETNITMGADVAELYRLELGDYKLVEITPIGLAPTSVRRYTTTGASRNKRGVFVLGFLG
FLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVT
AIEKYLKDQAQLNSWGCAFRQVCHTTVPWPNATLLPNWNNMTWQEWEKQVNFLEANITQL
LEEAQIQQEKNMYELQKLNSWDVFGNWFDLTSWVKYIQYGVFIVLGVIGLRIVIYVVQML
ARLRQGYRPVFSSPPAYVQQIPIHKGQEQPIEEGEEGDGGDRGGSRSWPWQIEYIHFLIR
QLIRLLTWLFSNCRTYLLRTYQILQPTFQRFFSTAQRIQEVLRTEIAYLQYGYRWFQEAA
QAAWRATREALESAWRDLWETLGRVGRGILAIPRRIRQGLELTLL
Download sequence
Identical sequences A0A075VQV7

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]