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Domain assignment for A0A075VRX0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A075VRX0
Domain Number 1 Region: 68-113,215-320,347-510
Classification Level Classification E-value
Superfamily gp120 core 3.14e-91
Family gp120 core 0.00000546
Further Details:      
 
Domain Number 2 Region: 561-681
Classification Level Classification E-value
Superfamily Virus ectodomain 1.78e-48
Family Virus ectodomain 0.000000659
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A075VRX0
Sequence length 887
Comment (tr|A0A075VRX0|A0A075VRX0_SIV) Transmembrane protein gp41 {ECO:0000256|RuleBase:RU363095} OX=11723 OS=Simian immunodeficiency virus (SIV). GN=env OC=Lentivirus; Primate lentivirus group. OH=9598
Sequence
MGCLGNQLLIAILLLSAYGIYCTQYVTVFYGIPAWRNASVPLFCATKNRDTWGTTQCLPD
NDDYSELALNVTESFDAWDNTVTEQAIEDVWNLFETSIKPCVKLTPLCIAMRCNKTETDR
WGLTGNATTTTPTITSSTKITTTPETAMAINESNPCIEYNNCTGLEQEPMVSCKFNMTGL
KRDKKKEYNETWYSRDLVCEQGTDGSESKCYMNHCNTSVIQESCDKHYWDAIRFRYCAPP
GYALLRCNDSNYSGFEPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWQGKGNN
TIISLNKYYNLTMRCRRPGNKTVLPVGTMSGFRFHLQQLNKRPRQAWCRFEGKWKEAIQE
VKETIVKHPRYTGINDTNKIYLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNA
SHPRWDQNPKEGHRRNYVPCHIRQIINTWHKVGIHVYLPPREGDLTCNSTVTSILATMDW
NSNDETNITMGADVAALYRLELGDYKLVEITPIGLAPTSVRRYTTTGASRNKRGVFVLGF
LGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTR
VTAIEKYLKDQAQLNSWGCAFRQVCHTTVPWPNATLLPNWSNMTWQEWEKQVNFLEANIT
QLLEDAQIQQEKNMYELQKLNSWDVFGNWFDLTSWVKYIQYGVFIVLGVIGLRVVIYVVQ
MLARLRQGYRPVFSSPPAYVQQIPIRKGQEQPTEEGEEGDGGDRGGNRSWPWQIEYIHFL
IRQLIRLLTWLFSNCRTYLLRIYQILQPVFQRFFSTAQRIQEVIRTEIAYLQYGCRWFQE
AAQAAWRAARETLESAWRDLWEVLGRVGRGILAIPRRIRQGLELTLL
Download sequence
Identical sequences A0A075VRX0

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