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Domain assignment for A0A075VS46 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A075VS46
Domain Number 1 Region: 68-113,214-319,346-510
Classification Level Classification E-value
Superfamily gp120 core 6.28e-90
Family gp120 core 0.00000741
Further Details:      
 
Domain Number 2 Region: 561-681
Classification Level Classification E-value
Superfamily Virus ectodomain 2.97e-49
Family Virus ectodomain 0.000000593
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A075VS46
Sequence length 887
Comment (tr|A0A075VS46|A0A075VS46_SIV) Transmembrane protein gp41 {ECO:0000256|RuleBase:RU363095} OX=11723 OS=Simian immunodeficiency virus (SIV). GN=env OC=Lentivirus; Primate lentivirus group. OH=9598
Sequence
MGCLGNQLLIAILLLSAYGIYCTQYVTVFYGIPAWRNATVPLFCATKNRDTWGTTQCLPD
NNDYSELALNVTESFDAWDNTVTEQAIEDVWNLFETSIKPCVKLTPLCIAMRCNKTETDK
WGLTRNATATTPTPTTSSTTTKPETALAINENNSCIEYNNCTGLEQEPMVSCKFNMTGLK
RDKKKEYKEIWYSRDLVCEQGTNGSESKCYMNHCNTSVIQESCDKHYWDAIRFRYCAPPG
YALLRCNDSNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGKRNNT
IISLNKYYNLTMRCRRPGNKTVLPVGTMSGFRFHLQQINKKPRQAWCRFEGLWKEAIQEV
KKTIVKHPRYTGTNDTDKIYLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNTS
HPQWGGQTPRERHKRNYVPCHIRQIINTWHKVGIHVYLPPREGDLTCNSTVTSLLANIEW
RNNNETNITMGADVAELYRLELGDYKLVEITPIGLAPTSVRRYTTTGASRNKRGVFVLGF
LGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTR
VTAIEKYLKDQAQLNSWGCAFRQVCHTTVPWPNATLLPNWNNMTWQEWEKQVNFLEANIT
QLLEEAQIQQEKNMYELQKLNSWDVFGNWFDLASWVKYIQYGVFIVLGVIGLRIIIYVVQ
MLARLRQGYRPVFSSPPAYVQQIPIRKRQEQPTEEGEEGDGGDRGGSKSWPWQIEYIHFL
IRQLIRLLTWLFSNCRTYLLRIYQILQPVFQRFFSTVQRIQEVIRTEISYLQYGCHWFQE
AVRAVWRAAREALESAWRDLWETLGRVGRGILAIPRRIRQGLELTLL
Download sequence
Identical sequences A0A075VS46

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