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Domain assignment for A0A075VSN0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A075VSN0
Domain Number 1 Region: 68-113,215-320,347-511
Classification Level Classification E-value
Superfamily gp120 core 4e-92
Family gp120 core 0.00000544
Further Details:      
 
Domain Number 2 Region: 562-682
Classification Level Classification E-value
Superfamily Virus ectodomain 2.22e-49
Family Virus ectodomain 0.000000633
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A075VSN0
Sequence length 888
Comment (tr|A0A075VSN0|A0A075VSN0_SIV) Transmembrane protein gp41 {ECO:0000256|RuleBase:RU363095} OX=11723 OS=Simian immunodeficiency virus (SIV). GN=env OC=Lentivirus; Primate lentivirus group. OH=9598
Sequence
MGCLGNQLLIAILLLSAYGIYCAHYVTVFYGVPAWRNATVPLFCATKNRDTWGTTQCLPD
NDDYTELAINVTESFDAWDNTVTEQAIEDVWNLFETSIKPCVKLTPLCIAMRCNKTETDK
WGLTRNATATTATTTSTTTTTKPDVAAKVINESDPCIRNNSCAGLEQEPMVSCKFNMTGL
KRDKKREYNETWYSRDLVCEQSTNESESKCYMNHCNTSVIQESCDKHYWDAIRFRYCAPP
GYALLRCNDSNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGKRNS
TIISLNKYYNLTIRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCWFGGSWRKAIQE
VKETIVKHPRYTGTNDTKKINLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNT
SHPRWTQQKDKERKKRNYVPCHIRQIINTWHKVGKNVYLPPREGDLTCNSTVTSLMANIE
WIDNNETNITMGADVAELYRLELGDYKLVEITPIGLAPTTVRRYTTTGASRNKRGVFVLG
FLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQT
RVTAIEKYLKDQAQLNSWGCAFRQVCHTTVPWPNETLLPNWNNMTWQEWEKQVNFLEANI
TQLLEEAQIQQEKNMYELQKLNSWDIFGNWFDLTSWIKYIQYGVFIVLGVIGLRIIIYVV
QMLARLRQGYRPVFSSPPAYVQQIPIRKGQEQPTKEEEEGDGGDRGGSRSWPWQIEYIHF
LIRQLIRLLTWLFNNCRTYLLRIYQILQLVFQRLFSAVQRVQEVIRTEISYLQYGCRWFQ
EAVRAAWRAARETLASAWRDLWETLGRVGRGILAIPRRIRQGLEITLL
Download sequence
Identical sequences A0A075VSN0

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