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Domain assignment for A0A075VSP6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A075VSP6
Domain Number 1 Region: 68-113,210-315,343-507
Classification Level Classification E-value
Superfamily gp120 core 2.88e-89
Family gp120 core 0.00000646
Further Details:      
 
Domain Number 2 Region: 558-678
Classification Level Classification E-value
Superfamily Virus ectodomain 3.44e-50
Family Virus ectodomain 0.00000065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A075VSP6
Sequence length 884
Comment (tr|A0A075VSP6|A0A075VSP6_SIV) Transmembrane protein gp41 {ECO:0000256|RuleBase:RU363095} OX=11723 OS=Simian immunodeficiency virus (SIV). GN=env OC=Lentivirus; Primate lentivirus group. OH=9598
Sequence
MGCLGNQLLIAILLLSAYGIYCTHYVTVFYGVPAWRNATVPLFCATKNRDTWGTTQCLPD
NDDYSELALNVTESFDAWDNTVTEQAIEDVWNLFETSIKPCVKLTPLCITMRCNKTETDK
WGLTRAATSTTTTLATTPSATVKVLAKNDTCIQNNNCTGLGQEPMVNCKFNMTGLKQDKK
KEYNETWYSRDLVCEQSTNGSESKCYMNHCNTSVIQESCDKHYWDAIRFRYCAPPGYALL
RCNDSNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYLYWHGKRNSTIISL
NKYYNLTMRCRRPGNKTILPITIRSGRVYHSQLIRNEKPKQAWCRFEGSWKEAIQEVKET
IVKHPRYTGTNDTKRINLTAPAGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNTSHLR
WKNQNPRERYKRNYVPCHIRQIINTWHKVGINVYLPPREGDLTCNSTVTSLMANIDWNSN
NETNITMGADVAELYRLELGDYKLVEITPIGLAPTNVRRYTTTGAPRNKRGVFVLGFLGF
LATAGSAMGAASLTLSAQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTA
IEKYLKDQAQLNSWGCAFRQVCHTTVPWPNTSVMPNWNNMTWQQWEKQVNFLEANITQLL
EEAQIQQEKNMYELQKLNSWDVFGNWFDLTSWIKYIQYGVFIVLAVIGLRIIIYVVQMLA
RLRQGYRPVFSSPPAYVQQIHISKGQEQPIKEGEEGDGGDRGGNRSWPWQIEYIHFLIRQ
LIRLLTWLFSNCRTYLLRLYQILQPVFQRLFSVIQRIQEVIRTEIAYLQYGCRWFQEAAQ
AAWRAARETLESAWRDLWETLGRVGRGILAIPRRIRQGLELTLL
Download sequence
Identical sequences A0A075VSP6

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