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Domain assignment for A0A075VSQ2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A075VSQ2
Domain Number 1 Region: 68-113,211-316,344-508
Classification Level Classification E-value
Superfamily gp120 core 4.61e-89
Family gp120 core 0.0000047
Further Details:      
 
Domain Number 2 Region: 559-679
Classification Level Classification E-value
Superfamily Virus ectodomain 8.49e-50
Family Virus ectodomain 0.000000677
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A075VSQ2
Sequence length 882
Comment (tr|A0A075VSQ2|A0A075VSQ2_SIV) Transmembrane protein gp41 {ECO:0000256|RuleBase:RU363095} OX=11723 OS=Simian immunodeficiency virus (SIV). GN=env OC=Lentivirus; Primate lentivirus group. OH=9598
Sequence
MGCLGNQLLIAILLLSAYGIYCTHYVTVFYGVPAWRNATVPLFCATRNRDTWGTTQCLPD
NDDYSELALNVTESFDAWDNTVTEQAIEDVWNLFETSIKPCVKLTPLCITMRCNKTETDK
WGLTRTVAPTSTTSTTTTTGVTVEVVNENNTCIQNNNCTGLEQEPMVNCKFNMTGLKQDK
RKEYNETWYSRDLVCEQSTNGSESKCYMNHCNTSVIQESCDKHYWDAIRFRYCAPPGYAL
LRCNDSNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYLYWHGKRNSTIIS
LNKYYNLTMKCRRPGNKTILPITIRSGRVYHSQLIRNEKPRQAWCRFEGSWKEAIQEVKE
TIVKHPRYTGTNDTKKINLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNTSHL
RWGNQNPRDKYKRNYVPCHIRQIINTWHKVGINVYLPPREGDLTCNSTVTSLLANIDWNS
NNGTNITMGADVADLYRLELGDYKLVEITPIGLAPTTVRRYTTTGAPRNKRGVFVLGFLG
FLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVT
AIEKYLKDQAQLNSWGCAFRQVCHTTVPWPNTSVMPNWNNMTWQQWEKQVNFLEANITQL
LEEAQIQQEKNMYEVQKLNSWDVFGNWFDLTSWIKYIQYGVFIVLAVIGLRIVICVVQML
ARLRQGYRPVFSSPPAYVQQIHISKGQEQPIEEGEEGDGGDRGGNRSWPWQIEYIHFLIR
QLIRLLTWLFSNCRTYLLRIYQILQPVSQRLFSIIQEVIRTEIAYLQYGCRWFQEAAQAA
WRAARETLEGAWRDLWETLGRVGRGILAIPRRIRQGLELTLL
Download sequence
Identical sequences A0A075VSQ2

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