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Domain assignment for A0A076V4N0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A076V4N0
Domain Number 1 Region: 131-289
Classification Level Classification E-value
Superfamily Retrovirus capsid protein, N-terminal core domain 1.06e-80
Family Retrovirus capsid protein, N-terminal core domain 0.0000000571
Further Details:      
 
Domain Number 2 Region: 2-136
Classification Level Classification E-value
Superfamily Retroviral matrix proteins 7.85e-64
Family Immunodeficiency virus matrix proteins 0.000000537
Further Details:      
 
Domain Number 3 Region: 280-362
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.21e-32
Family Retrovirus capsid protein C-terminal domain 0.0000191
Further Details:      
 
Domain Number 4 Region: 379-430
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 3.61e-17
Family Retrovirus zinc finger-like domains 0.0000444
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A076V4N0
Sequence length 499
Comment (tr|A0A076V4N0|A0A076V4N0_9HIV1) Gag polyprotein {ECO:0000256|RuleBase:RU004487, ECO:0000256|SAAS:SAAS00998370} KW=Complete proteome OX=11676 OS=Human immunodeficiency virus 1. GN=gag OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSDGCRQI
LGQLQPSLQTGSEELKSLYNTVAVLYCVHQKIDVKDTKEALDKIEEEQNKSKKKIQQAAA
DTGNNSQVSQNYPIVQNIQGQMVHQALSPRTLNAWVKVVEEKAFSPEVIPMFSALAEGAT
PQDLNTMLNTVGGHQAAMQMLKDTINDEAAEWDRLHPVHAGPIPPGQMREPRGSDIAGTT
STLQEQIQWMTSNPPVPVGEIYKRWIILGLNKIVRMYSPVSILDIKQGPKESFRDYVDRF
FKCLRAEQGTQEVKNWMTETLLVQNANPDCKTILKALGPQATLEEMMTACQGVGGPAHKA
RVLAEAMSQATNSNLMMMQKGNYKGQRKFVKCFNCGKEGHIARNCRAPRKKGCWKCGNEG
HQMKDCTERQANFLGKMWPSHKGRPGNFLQNRPEPTAPPAEPTAPPAESLGRGEEKKIEG
LYPPLASLKSLFGSDPWSQ
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Identical sequences A0A076V4N0

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