SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A076V581 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A076V581
Domain Number 1 Region: 157-496
Classification Level Classification E-value
Superfamily gp120 core 3.92e-169
Family gp120 core 0.000000000303
Further Details:      
 
Domain Number 2 Region: 544-669
Classification Level Classification E-value
Superfamily Virus ectodomain 3.34e-58
Family Virus ectodomain 0.00000841
Further Details:      
 
Domain Number 3 Region: 85-134
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000628
Family gp120 core 0.00016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A076V581
Sequence length 860
Comment (tr|A0A076V581|A0A076V581_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRAKGIRKNSQHWWTWGTMLLGLLMTCSAADQLWVTVYYGVPVWKDATTTLFCASDAKAY
DTEVHNVWATHACIPTDPSPQEVQLNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKL
TPLCVTLSCSNLTNSNNSTHNTSDLGNNTDLGSMAGEMKNCSFNITTQIKNKNRKEHALF
NKIDLVPIDNNNTNYMLVNCNTSVITQACPKVTFEPIPIHYCTPAGFALLKCKDKMFNGT
GPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVIIRSENFTNNAKTIIVQLNETVQINC
TRPNNNTRKSIHFGPGQALYATGEIIGDIRKAHCNISKEKWNNTLQHIVRKLGEQFKNLT
TISFNKSSGGDPEITMHSFNCGGEFFYCDTAKLFNSTWERRNDTNTWESNNTIPNENITL
PCRIKQIINRWQEVGKAMYAPPIAGRIECTSNITGLLLTRDGGSNNSSNDTFRPGGGDMK
DNWRSELYKYKVVQIQPLGVAPTRSRRRVVQREKRAVTLGAMFLGFLGAAGSTMGAASVT
LTVQARQLLSGIVQQQSNLLRAIDAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIW
GCSGRLICTTNVPWNTSWSNKTLEKIWDNMTWMEWEREIDNYTGIIYNLIEESQNQQEKN
ELELLELDKWSSLWSWFDITQWLWYIRIFIIIVAGLIGLRIVLFVLSVVKRVRQGYSPLS
FQIRLPAQRGPDGPEGIEEEGGERGRDRSGPLVTGFLAIIWDDLRSLCLFSYHLLRDLIL
IVARIVGFLGHRGWETLKNWWNLLQYWIQELKSSAVSLLNAIAIAVAEGTDRSIEIVQRI
GRAIIHIPRRIRQGLERALL
Download sequence
Identical sequences A0A076V581

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]