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Domain assignment for A0A076V6R1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A076V6R1
Domain Number 1 Region: 144-506
Classification Level Classification E-value
Superfamily gp120 core 1.67e-167
Family gp120 core 0.000000000272
Further Details:      
 
Domain Number 2 Region: 554-682
Classification Level Classification E-value
Superfamily Virus ectodomain 4.85e-54
Family Virus ectodomain 0.0000105
Further Details:      
 
Domain Number 3 Region: 86-136
Classification Level Classification E-value
Superfamily gp120 core 0.0000000000000361
Family gp120 core 0.00018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A076V6R1
Sequence length 873
Comment (tr|A0A076V6R1|A0A076V6R1_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} KW=Complete proteome OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVRGMKKNWQHLGIWGLLFLGVLIICNATEEEESWVTVYYGVPVWKEASTTLFCASDAK
AYDTEAHNVWATHACVPTDPSPQEIEMKNVIENFNMWKNNMVEQMHDDIISLWDQSLKPC
VKLTPLCVTLNCSNRTLQNITMVGELKNCSFNITSSIKDKVQKGHAFFNTLDVTPMEEEE
NNKSNCTGVSTTTAASPRNRNKNYRNYRLISCNTSVVTQACPKISFEPIPIHYCAPAGFA
ILKCKDKKFNGKGPCKNVSTVQCTHGIRPVVSTQLLLNGSLSEEEVVIRSENFTDNAKVI
IVQLNQSVEINCTRPSNNTRTGIHMGPGRAYWATGNIIGDIRQAHCNISEAKWNNTLRQI
AEKLREQFNKTIIFNPSSGGDLEIVTHSFNCGGEFFYCNTTQLFDSTWNSTENSNNTEGN
KTIILPCRIKQIINMWQGVGRAMYAPPIKGNISCSSNITGLIITRDGGNNNDTSELNSPE
IFRPAGGNMKDNWRSELYKYKVVKIEPLGVAPTRAKRRVVQREKRAIGIGAVFIGFLGAA
GSTMGAASMTLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVENY
LKDQQLLGIWGCSGKLICTTTVPWNKTWSNRNLSELWGSNSSLTWQQWEKEIDNYTSLIY
TLIEESQNQQEKNEQDLLALDKWASLWNWFEISKWLWYIKIFIMIVGGLIGLRIVFAVLS
IVNRVRQGYSPLSLQTHHPTPRGPDRPGGIEEEGGESDRGTSGPLVHGFLAIIWIDLRSL
CLFLYHRLRDLLLIVTRIVELLGRRGWEVLKYWWNLLKYWSQELKNSAVSLLNTTAIVVA
EGTDRIIEGLQRVGRAVLNVPRRIRQGFERALL
Download sequence
Identical sequences A0A076V6R1

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