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Domain assignment for A0A076V760 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A076V760
Domain Number 1 Region: 81-347
Classification Level Classification E-value
Superfamily gp120 core 3.63e-145
Family gp120 core 0.00000000213
Further Details:      
 
Domain Number 2 Region: 395-520
Classification Level Classification E-value
Superfamily Virus ectodomain 8.34e-59
Family Virus ectodomain 0.00000619
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A076V760
Sequence length 707
Comment (tr|A0A076V760|A0A076V760_9HIV1) Transmembrane protein gp41 {ECO:0000256|RuleBase:RU363095} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVMEIRKNCQDLLRWGTLLLGMLMICSAMGNLWVTVYYGVPVWREANTTLFCASDAKAY
DSEVHNVWATHACVPTDPNPQEIIPIHYCAPAGYAILKCKDNEFNGTGPCRNVSTVQCTH
GIKPVVSTQLLLNGSLAEGDIMIRSQNISDNAKTIIVHLNESVQINCTRPNNNTRKSIHL
GPGQAFYATEDIIGDIRMAHCNISGEQWNTTLRRVKAKLQPHFFNKTIVFNSSSGGDLEI
TMHSFNCRGEFFYCNTSGLFTENGTSNGTITLPCRIKQIINMWQEVXRAMYAAPVAGNIS
CNSNITGLLLTRDGGNXTXTEIFRPGGGNMKDNWRSELYKYKVVEIQPLGIAPTTAKRRV
VERGKRAVGIGALFIGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIQAQQHL
LQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLHEIWDN
MTWMQWEREIDNYTSLIYTLIEESQNQQEKNEQELLELDKWANLWNWFDITNWLWYIKIF
IMVVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGTEEEGGEQDRGRS
IRLVDGFLALIWDDLRSLCLFSYHRLRDLLLIVELLGRRGWEALKYWWSLLQYWSQELKN
SAVSLLNATAIAVAEGTDRVIEIIQRAVGAILNIPRRIRQGFERALL
Download sequence
Identical sequences A0A076V760

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