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Domain assignment for A0A076V9U5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A076V9U5
Domain Number 1 Region: 151-485
Classification Level Classification E-value
Superfamily gp120 core 1.28e-155
Family gp120 core 0.00000000079
Further Details:      
 
Domain Number 2 Region: 533-658
Classification Level Classification E-value
Superfamily Virus ectodomain 9.71e-55
Family Virus ectodomain 0.0000124
Further Details:      
 
Domain Number 3 Region: 84-136
Classification Level Classification E-value
Superfamily gp120 core 0.000000000133
Family gp120 core 0.00046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A076V9U5
Sequence length 849
Comment (tr|A0A076V9U5|A0A076V9U5_9HIV1) Transmembrane protein gp41 {ECO:0000256|RuleBase:RU363095} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKAKEIRKNCQHLKKWSIMLLGMLIICSAKKQLKVTVYYKVPVKKKATATLFCASNAKAY
NPKVHNVKATHACVPTDPNPLKIKLKNVTEKFNMKKNNMVKQMHKNIISLKNKSLKPCVK
LTPLCVTLNYNNLNCTNNNTANNSCNSGIKKNIKNCSFNFTSNIKNKKQKKYALFHKLNV
VKLNNNSTNYMLINCNTSVITQACPKVSFKPIPIHYCAPAGFAILKCNNKKFNKSEPCTN
VSTVQCTHKIKPVVSTQLLLNSSLAKKKVVIKSKNFTDNAKTIIVQLKKPVNITCIKPGN
NTKKSIHVKPGSAFYATENIIKDIKQAHCNISKTEKNNTLNQIVTELKKQFANKTIIFNQ
SSGGDPEIVMHTFNCGGEFFYCDSTQLFNSTWEVNGTMNTTEGSNTTDITLPCRIKQIIN
RWQEVGKAMYAPPIRGQIKCMSNITGLLLTRDGGQNGSETFRPGGGNMKDNWRSELYKYK
VVQIEPLGIAPTKAKRRVVQREKRAIGMGALFLGFLGAAGSTMGAASLTLTVQARQLLTG
IVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTS
VPWNKTWNNRNQTQIWENMTWLQWEKEIDNVTNEIYTLLTESQSQQEKNELELLELDKWA
SLWNWFDISQWLWYIRIFIMIVGGLIGLRIIFTILSVVNRVRQGYSPLSFQTLLPTQRGP
DRPGGIEEEGGERDSGTSVRLVNGFLAIIWDDLRNLCLFSYRHLRDLLLIAARIVELLGR
RGWEVLKYWGNLLQYWIQELKNSAISLFNAIAIAVAEGTDRIIVAAQTVGRAILHIPRRI
RQGFERALQ
Download sequence
Identical sequences A0A076V9U5

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