SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A077H0C5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A077H0C5
Domain Number 1 Region: 158-491
Classification Level Classification E-value
Superfamily gp120 core 1.47e-171
Family gp120 core 0.000000000244
Further Details:      
 
Domain Number 2 Region: 540-665
Classification Level Classification E-value
Superfamily Virus ectodomain 2.43e-58
Family Virus ectodomain 0.00000841
Further Details:      
 
Domain Number 3 Region: 84-130
Classification Level Classification E-value
Superfamily gp120 core 0.0000000000000255
Family gp120 core 0.0002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A077H0C5
Sequence length 856
Comment (tr|A0A077H0C5|A0A077H0C5_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVKEIKKNYHYLWRWGMMLLGMLMISSATEQLWVTVYYGVPVWKEATTTLFCASDAKAY
ETEVHNVWATHACVPTDPNPQEIVLGNVTEDFNMWKNNMVEQMNEDIISLWDQSLKPCVK
LTPLCVTLNCTDGWWNNTEGKNDTNHRNLNSSWEMNGEIKNCSFNVTTNIKDRIQREYAL
FYKLDVVSIDGSNTSYRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNNTFSG
KGPCRNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENFTDNAKTIIVQLNKSVAIN
CIRFNNNTRKSIHIGPGSAFYATGDIIGDIRRAHCNISREQWNNTLQQIVEKLREQFGNN
KIIFKPSSGGDPEIVMFSFNCGGEFFYCNTTELFNSTWNGTVNESNNTGGNIILPCRIKQ
IINMWQEVGKAMYAPPIKGQIKCSSNITGLLLTRDGGTNKTNDTETFRPGGGNMKDNWRS
ELYKYKIVKIEPLGVAPTKAKRRVVQREKRAVGTLGAMFLGFLGAAGSTMGAASLTLTVQ
ARLLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLALESYLKDQQLLGIWGCSG
KLICTTAVPWNASWSNKSLNEIWDNMTWMEWEKEIDNYTSIIYTLIEQSQNQQEKNEQEL
LELDKWASLWNWFSITKWLWYIKIFIMIVGGLIGLRIVFAILSIVNRVRQGYSPLSFQIR
PPAPRGPDRPEGTEEEGGERDRDRSGSLVNGLFALIWIDLRSLCLFSYHRLRDLILIVTR
IVELLGRRGWEILKYWWNLLQYWIQELKSSAVSLLNTTAIAVAEGTDRLIEVVQRTFRTF
LHIPRRIRQGLERALL
Download sequence
Identical sequences A0A077H0C5

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]