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Domain assignment for A0A077H0U8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A077H0U8
Domain Number 1 Region: 153-491
Classification Level Classification E-value
Superfamily gp120 core 1.57e-169
Family gp120 core 0.000000000368
Further Details:      
 
Domain Number 2 Region: 540-665
Classification Level Classification E-value
Superfamily Virus ectodomain 8.9e-59
Family Virus ectodomain 0.00000803
Further Details:      
 
Domain Number 3 Region: 87-136
Classification Level Classification E-value
Superfamily gp120 core 0.0000000000000106
Family gp120 core 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A077H0U8
Sequence length 856
Comment (tr|A0A077H0U8|A0A077H0U8_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVKEIRKNYQRLWRWGTMLTMLLGMLMICSAAENLWVTVYYGVPVWKEATTTLFCASDA
KAYETEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMAEQMHEDIISLWDQSLKP
CVKLTPLCVTLNCTNLNNTETNNTAEIKYMEDEMKNCSFNVSTRIRNKMQQEYALFYKLD
IVPIDNKSYTLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGSCTNV
STVQCTHGIRPVVSTQLLLNGSLAEDEVVIRSENITDNAKTIIVQLNTAVKINCTRPGNN
TRKSIPMGPGKVIYATGEIVGNTRQAHCNLSKPQWAKTLTLVATKLREQFNKTIAFNHSS
GGDPEIVMHSFNCGGEFFYCNTTQLFNGTWNGNWTDTWNGTWNETHPTSNDTITLPCRIK
QIINRWQEVGKAMYAPPIRGNITCSSNITGLLLTRDGGKLNGTIETFRPGGGDMRDNWRS
ELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGMLGAMFLGFLGAAGSTMGAASITLTVQ
ARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSG
RLICTTTVPWNASWSNKSLNEIWDNMTWMQWEKEIDNYTKLIYTLIEESQNQQEKNELDL
LELDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSLQTR
LPAPRGPDRPEGIEGEGGERGREGSSRLVHGFLALIWDDLRSLCLFSYHRLRDLLLIAAR
IVELLGRRGWEALTYWWNLLQYWIQELKNSAVSLLNATAIAVAEGTDRVIEVAQRIWRAF
IHIPRRIRQGFERALL
Download sequence
Identical sequences A0A077H0U8

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