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Domain assignment for A0A077H172 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A077H172
Domain Number 1 Region: 154-496
Classification Level Classification E-value
Superfamily gp120 core 4.41e-172
Family gp120 core 0.000000000209
Further Details:      
 
Domain Number 2 Region: 544-668
Classification Level Classification E-value
Superfamily Virus ectodomain 1.7e-58
Family Virus ectodomain 0.000007
Further Details:      
 
Domain Number 3 Region: 84-137
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000667
Family gp120 core 0.00013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A077H172
Sequence length 860
Comment (tr|A0A077H172|A0A077H172_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MIVMGIKKNYQHLWRGGILLLGILMICSTTENLWVTVYYGVPVWKEATTTLFCASDAKAY
TTEAHNVWATHACVPTDPNPQEIVLKNVTEEFNMWKNDMVEQMHEDVISLWDQSLKPCVK
LTPLCVTLNCTTLNITTNVNGTDNNSSISEGKGEMKNCSFNVTTNRRDKMKKEHALFYTL
DIAPIDNDNSSYTLTSCNTSVLTQACPKVSFEPIPIHYCAPAGFAILQCNEKNFTGKGPC
KNVSTVQCTHGIRPVVSTQLLLNGSLAEKEVVIRSDNITNNAKTIIVQLTEPVQINCIRP
NNNTRRSIHIGPGRAFYATGDIIGKIRQAHCNVSREQWNTTLGKIVEKLREQFKNKTIVF
NQSSGGDPEIVMHSVNCGGEFFYCNTTQLFNSTWIWNSTINSTENSRNDTNITLPCRIKQ
IINMWQEVGKAMYAPPIAGIIKCSSNITGLLLTRDGGNTTEGNTTKNDTEIFRPGGGDMR
DNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGAAALT
LTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIW
GCSGKLICPTAVPWNASWSNRSLDEIWQNMTWMEWEKEIDNYTSIIYNLIEESQNQQEKN
EQELLQLDNWASLWNWFSITNWLWYIKLFIMIVGGLIGLRIVFVVLSIVNRVRQGYSPVS
FQTHFPGPRGPDRPGGIQEEGGETGRDTSRPLVNGFLEIIWIDLRSLCLFSYRLLRDLLL
IVTRTVELLGRRGWEALKLWWNLLQYWSQELKNSAVSLLNAIAVAVAEGTDRIIEILQRI
FRAILHIPTRIRQGLERALL
Download sequence
Identical sequences A0A077H172

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