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Domain assignment for A0A077H1W0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A077H1W0
Domain Number 1 Region: 160-504
Classification Level Classification E-value
Superfamily gp120 core 2.26e-171
Family gp120 core 0.000000000245
Further Details:      
 
Domain Number 2 Region: 552-677
Classification Level Classification E-value
Superfamily Virus ectodomain 5.46e-58
Family Virus ectodomain 0.00000601
Further Details:      
 
Domain Number 3 Region: 84-133
Classification Level Classification E-value
Superfamily gp120 core 0.0000000000000161
Family gp120 core 0.00018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A077H1W0
Sequence length 868
Comment (tr|A0A077H1W0|A0A077H1W0_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVTGMRKNYQYLWRWGTMLLGILLISSAAEQLWVTVYYGVPVWKEATTTLFCASDAKAY
ETEVHNVWATHACVPTDPNPQEVVLGNVTEDFNMWKNDMVEQMQEDIISLWDQSLKPCVK
LTPLCVTLNCSDELANTSFTNNTTNNSTGMDNSTVMEKGEVKNCSFNVTTSIRDKMQKEY
ALFYKLDVVQIDKNSTSYRLINCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCNNKTF
NGKGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSDNFTDNAKTIIVQLKEPVQ
INCTRPHNNTLKGIHIGPGRAFYATGSIIGNIRQAHCNISGAAWNKTLVGVAKKLTEQFE
NKTISFNRSSGGDPEIVMHSFNCAGEFFYCDTTPLFNSIWNTTQIFNGTWNDTVGSGEND
TIILQCRIKQIINMWQEVGKAMYAPPIRGQIRCESNITGLLLTRDGGNGENSTENSTEIF
RPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGLGAVLFGFLGAAGS
TMGAASITLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARILAVERYLK
DQQLLGIWGCSGKIICTTAVPWNTTWSNKSLDEIWNNMTWMQWDREINNYTNIIYNLIEE
SQNQQEKNEKELFELDKWANLWNWFDITQWLWYIKIFIMIVGGLVGLRIVFIVLSVVNRV
RQGYSPLSFQTHFPAPKGPDRPGGTEEEGGEEDRDKSRRLVDGFLALIWVDLRSLCLFSY
HRLRDLLLIVTRIVELLGRRGWEILKYWWNLLQYWSQELKNSAVSLLNATAITVAEGTDR
IIEILQRICRAILNIPVRIRQGLERALL
Download sequence
Identical sequences A0A077H1W0

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