SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A077H1X7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A077H1X7
Domain Number 1 Region: 156-414,442-527
Classification Level Classification E-value
Superfamily gp120 core 2.45e-157
Family gp120 core 0.000000000744
Further Details:      
 
Domain Number 2 Region: 575-700
Classification Level Classification E-value
Superfamily Virus ectodomain 1.52e-58
Family Virus ectodomain 0.00000895
Further Details:      
 
Domain Number 3 Region: 84-136
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000239
Family gp120 core 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A077H1X7
Sequence length 891
Comment (tr|A0A077H1X7|A0A077H1X7_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRAKGIRKNCQHLWRWGIMLLGMLMICSAGEQLWVTVYYGVPVWKEANTTLFCASDAKAY
DTEAHNVWATHACVPTDPNPQEVELENVTEYFNMWKNNMVEQMHEDIISLWDQSLKPCVK
LTPLCVTLDCTNVTYTPNNNCTTNNRTVNATREDGDMKNCSFNITTSIKNKMQKEYALFY
KLDITPIDPDKKKNKKGNGTDDTKSYMLISCNTSVVTQACPKISFEPIPIHYCAPAGFAI
LKCKDKNFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEDEVMIRSRNFSENADNII
VQLNKSIAINCTRPNNNTSKGIHMGPGRAFYATGRIIGDIRQAHCNLSRGDWWSALKQIV
TKLGEQYRNKTTIIFNQSSGGDPEIVRHSFNCGGEFFYCDTTNLFNSTWFRNDTGKSQNN
TMEPWTWNNETGTWDDKKLWTWTNINDTEHITLQCRIKQIINRWQEVGKAMYAPPISGLI
NCSSNITGLILARDGIDNKTETFRPIGGNMKDNWRSELYKYKVVKIEPLGIAPTRAKRRV
VQREKRSVTLGAMFLGFLGAAGSTMGAASLTLTVQARLLLSGIVQQQNNLLRAIEAQQHM
LQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNDSWSNKSYKAIWDN
MTWMQWEREIDNYTNIIYDLLEKSQNQQEKNEQDLLELDKWASLWNWFDITQWLWYIRIF
IMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQIRPPTPRGPDRPEGIEEEGGERDRDRS
ERLVTGFLPLIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQ
ELKNSAVSLLNATAIAVAAGTDRIIEVVQRICRAILNIPRRIRQGLERALL
Download sequence
Identical sequences A0A077H1X7

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]