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Domain assignment for A0A077H2N5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A077H2N5
Domain Number 1 Region: 149-486
Classification Level Classification E-value
Superfamily gp120 core 2.94e-171
Family gp120 core 0.000000000191
Further Details:      
 
Domain Number 2 Region: 534-659
Classification Level Classification E-value
Superfamily Virus ectodomain 4.04e-58
Family Virus ectodomain 0.00000828
Further Details:      
 
Domain Number 3 Region: 83-133
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000902
Family gp120 core 0.00017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A077H2N5
Sequence length 850
Comment (tr|A0A077H2N5|A0A077H2N5_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVKEIRKNYQHLWKWGIMLLGILMICSAENLWVTVYYGVPVWKEATTTLFCASDAKAYD
TEVHNVWATHACVPTDPNPQEVVLENVTEEFNMWKNDMVEQMHKDIISLWDQSLKPCVKL
TPLCVTLNCTDWNNATTTNNSWEKMERGEIKKCFFNITTGLRDRVKKEYAYLYKDDIVPI
DKDNASYRLISCNTSVITQACPKVSFQPIPIHYCTPAGFAILKCNDKGFNGKGLCRNVST
VQCTHGIRPVVSTQLLLNGSLAEREVVIRSDNFTDNAKIIIVQLNEPVEINCTRPSNNTR
KSIHIGPGRTFYATEIIGDIRQAHCNLSKTQWNNTLKQIVEQLRKQFENKTITFRNASGG
DPEIVMHSFNCGGEFFYCNSTELFNSIWNVNSTWNKTEGSNDTGNITLPCRIKQIINMWQ
EVGKAMYAPPIRGQIRCSSNITGLLLTRDGGNHNNSNTTEVFRPGGGDMRDNWRSELYKY
KVVKIEPLGLAPTRAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARLLLS
GIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARILAIERYLQDQQLLGIWGCSGKLICTT
TVPWNTSWSNKTLDKIWHNMTWMEWDKEITNYTGLIYKLLEESQNQQEKNEHELLELDKW
ANLWNWFDITNWLWYIKIFIMIVGGLVGLRIVFVVLSVVNRIRQGYSPLSFQTRFPAQRG
PDRPEGIEEEGGERDRDRSGRSVNGLLALIWVDLRSLCLFSYHRLRDLLLIVTRIVELLG
RRGWEALKYWWNLLQYWSQELKNSAVSLLNVTAIAVAEGTDRAIEILQRACRAIRHIPTR
IRQGLERALL
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Identical sequences A0A077H2N5

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