SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A077H607 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A077H607
Domain Number 1 Region: 154-525
Classification Level Classification E-value
Superfamily gp120 core 9.81e-160
Family gp120 core 0.000000000878
Further Details:      
 
Domain Number 2 Region: 573-698
Classification Level Classification E-value
Superfamily Virus ectodomain 1.04e-57
Family Virus ectodomain 0.0000102
Further Details:      
 
Domain Number 3 Region: 85-139
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000471
Family gp120 core 0.00017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A077H607
Sequence length 889
Comment (tr|A0A077H607|A0A077H607_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRAKGIRKNCQHLWRWGIMLLGMLMICSAGEQLWVTVYYGVPVWKEANTTLFCASDAKAY
DTEAHNVWATHACVPTDPNPQEVDLKNVTEYFNMWKNNMVEQMHEDIISLWDQSLKPCVK
LTPLCVTLNCTKVTCTTNCTTNNSTANATMKDGDMKNCSFNIPTSIKGKMREEYALFYKL
DITPIDPDKDKSNKGKGTDDTESYMLISCNTSVVTQACPKISFEPIPIYYCAPAGFAILK
CKDKNFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEDEVMIRSKNFSENADNILVQ
LNKSIAINCTRPNNNTSKGIHMGPGRAFYATGRIIGDIRQAHCNLSRRDWWSTLQHIATK
LGEQYKNKAIVFNQSSGGDPELTMHSFNCGGEFFYCDTTNLFNSTWIWNNISSYNISSYN
ISSYNHTETWNDTIQSWTWTNDTGHITLQCRIKQIINRWQEVGKAMYAPPISGLINCSSN
ITGLILTRDGGKDSNSSSETFRPIGGNMKDNWRSELYKYKVVKIEPLGIAPTRAKRRVVQ
REKRAVTLGAMFLGFLGAAGSTMGAASLTLTVQARLLLSGIVQQQNNLLRAIEAQQQMLQ
LTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICHTAVPWNTNWSSKSHDAIWENMT
WMQWEKEIDNYTNIIYDLLEKSQNQQEKNEQELLELDKWASLWNWFDITQWLWYIRLFIM
IVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQIRPPTPRGPDRPEGIGEEGGERDRDRSER
LVTGFLPLIWDDLRSLCLFSYHRLRDLLLIVTRIVQLLGRRGWEALKYWWNLLQYWSQEL
KNSAVSLLNATAIAVAEGTDRIIEVVQRICRAILNIPRRIRQGLERALL
Download sequence
Identical sequences A0A077H607

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]