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Domain assignment for A0A077H6F6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A077H6F6
Domain Number 1 Region: 175-510
Classification Level Classification E-value
Superfamily gp120 core 1.08e-173
Family gp120 core 0.000000000237
Further Details:      
 
Domain Number 2 Region: 558-683
Classification Level Classification E-value
Superfamily Virus ectodomain 5.66e-58
Family Virus ectodomain 0.00000937
Further Details:      
 
Domain Number 3 Region: 83-156
Classification Level Classification E-value
Superfamily gp120 core 0.0000000000000145
Family gp120 core 0.00017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A077H6F6
Sequence length 874
Comment (tr|A0A077H6F6|A0A077H6F6_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVKEIRKNYQHLWKWGIMLLGILMICSADNLWVTVYYGVPVWKEATTTLFCASDAKAYD
TEVHNVWATHACVPTDPNPQEVVLKNVTETFNMWKNDMVEQMQEDIISLWDQSLKPCVKL
TPLCVTLNCTDVVATNCTNTTATNNTTANCTNATTNSSTGANTTISSEKMMEKGEMKNCS
FNITAGIRDRVQKEYALLYKDDVVPIDNDNASYRLISCNTSVITQACPKVSFQPIPIHYC
APAGFVILKCNDKEFKGKGQCENVSSVQCTHGIRPVVSTQLLLNGSLAEGKVVIRSDNFT
DNTKTIIVQLNKSVEINCTRPNNNTRKSISIGPGRAFYATGSIVGDIRQAYCTLNKTQWN
NTLKQIFEKLKEQFPNKTIVFNRSSGGDPEIVMHSFNCGGEFFYCNTAKLFNSTWNDSSA
WNNTDNLENITLPCRIKQIINMWQEVGKAMYAPPISGIIRCSSKITGLLLTRDGGNRNDS
NTTEVFRPGGGDMRDNWRSELYKYKVVKIEPVGLAPTKAKRRAVQREKRAVGIGAVFLGF
LGAAGSTMGAASLTLTVQARLLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLA
VERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNKTLDEIWQNMTWREWEKEINNYTGFI
YNLLEESQNQQEKNEHELLELDKWANLWNWFDITNWLWYIKIFIMVVGGLVGLRIVFIVL
SIVNRVRQGYSPLSFQTRLPAQRGPDRPEGIEEEGGERDRDRSGHSVNGFLALIWDDLWS
LCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAV
AEGTDRAIDILQRACRAIRHIPTRIRQGLERALL
Download sequence
Identical sequences A0A077H6F6

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